You are querying gene by "AT2G38210".

Locus: AT2G38210 Alias: PDX1L4

Hormone Evidence Function category Gene Description PMID
ethyleneGeneOntology - response to ethylene stimulus

Basic gene information ( show / hide contents )

Locus AT2G38210 | Chromosome: 2 | Strand: +
Description response to ethylene stimulus
Alias
PDX1L4( alias )
Gene model
AT2G38210.1 | From: 16014090 | To: 16014768
Sequence
AT2G38210.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
cellular_component
cellular_component_unknown PMID:
biological_process
response to stress PMID:
response to ethylene stimulus PMID:
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT2G38210.1 
length: 679 
miRNA : ath-miR395b
length: 21 
 
mfe: -28.8 kcal/mol 
p-value: 0.007340 
 
position  270 
target 5' U      G             U 
           GGUCUC CUCAGAUGCUUCG  
           UCAGGG GGGUUUGUGAAGU  
miRNA  3' C                    C 
 
 
target: AT2G38210.1 
length: 679 
miRNA : ath-miR395c
length: 21 
 
mfe: -28.8 kcal/mol 
p-value: 0.005188 
 
position  270 
target 5' U      G             U 
           GGUCUC CUCAGAUGCUUCG  
           UCAGGG GGGUUUGUGAAGU  
miRNA  3' C                    C 
 
 
target: AT2G38210.1 
length: 679 
miRNA : ath-miR395f
length: 21 
 
mfe: -28.8 kcal/mol 
p-value: 0.003866 
 
position  270 
target 5' U      G             U 
           GGUCUC CUCAGAUGCUUCG  
           UCAGGG GGGUUUGUGAAGU  
miRNA  3' C                    C 
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

No related Ortholog Groups information for this gene.

DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF016804.000000000000006E-262378IPR001852Vitamin B6 biosynthesis protein
PROSITEPS511290.02679IPR001852Vitamin B6 biosynthesis protein