You are querying gene by "AT2G33860".

Locus: AT2G33860 Alias: ARF3

Hormone Evidence Function category Gene Description PMID
auxinMutant Hormone signal transduction transcription factor 7789281
GeneOntology - response to auxin stimulus 9409666

Basic gene information ( show / hide contents )

Locus AT2G33860 | Chromosome: 2 | Strand: -
Description transcription factor
Alias
ARF3( alias )
ETT( alias )
Gene model
AT2G33860.1 | From: 14332345 | To: 14336054
Sequence
AT2G33860.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
DNA binding PMID: 9409666
transcription factor activity PMID: 10476078
cellular_component
nucleus PMID:
biological_process
response to auxin stimulus PMID: 9409666
regulation of transcription, DNA-dependent PMID: 9409666
abaxial cell fate specification PMID: 16199616
vegetative phase change PMID: 16682356
auxin metabolic process PMID: 10476078
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   auxin   ]

Genotype PMID Type
arf3/ettin-2 7789281 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT2G33860.1 
length: 2367 
miRNA : ath-miR164a
length: 21 
 
mfe: -30.6 kcal/mol 
p-value: 0.010475 
 
position  98 
target 5' A                   G 
           GUAC UGUUCUGUUUCUCU  
           CGUG ACGGGACGAAGAGG  
miRNA  3' A    C              U 
 
 
target: AT2G33860.1 
length: 2367 
miRNA : ath-miR164b
length: 21 
 
mfe: -30.6 kcal/mol 
p-value: 0.015852 
 
position  98 
target 5' A                   G 
           GUAC UGUUCUGUUUCUCU  
           CGUG ACGGGACGAAGAGG  
miRNA  3' A    C              U 
 
 
target: AT2G33860.1 
length: 2367 
miRNA : ath-miR164c
length: 21 
 
mfe: -30.6 kcal/mol 
p-value: 0.013838 
 
position  98 
target 5' A                   G 
           GUAC UGUUCUGUUUCUCU  
           CGUG ACGGGACGAAGAGG  
miRNA  3' G    C              U 
 
 
target: AT2G33860.1 
length: 2367 
miRNA : ath-miR172e
length: 21 
 
mfe: -25.7 kcal/mol 
p-value: 0.032712 
 
position  1651 
target 5' U  A  A              A 
           UG GG AUCAUUGAGAUUCC  
           AC UC UAGUAGUUCUAAGG  
miRNA  3' U  G  G                
 
 
target: AT2G33860.1 
length: 2367 
miRNA : ath-miR414
length: 21 
 
mfe: -28.1 kcal/mol 
p-value: 0.002992 
 
position  779 
target 5' A    U            G  A 
           GAUG UGAUGGUGGAGA GA  
           CUGC ACUACUACUUCU CU  
miRNA  3' A    U            A    
 
 
target: AT2G33860.1 
length: 2367 
miRNA : ath-miR847
length: 21 
 
mfe: -26.1 kcal/mol 
p-value: 0.032008 
 
position  748 
target 5' A              U C    A 
           CAUUGAGAGGAAGG G GUGA  
           GUAGUUCUUCUUCU C CACU  
miRNA  3'                C U      
 
 
target: AT2G33860.1 
length: 2367 
miRNA : ath-miR869.1
length: 21 
 
mfe: -27.9 kcal/mol 
p-value: 0.007046 
 
position  1847 
target 5' G     G  C            A 
           CAGCA CA GGGUUGAGCCAG  
           GUUGU GU CUUAACUUGGUU  
miRNA  3'       G               A 
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_69977
AccessionTaxon
NP_180942 ( AT2G33860 )Arabidopsis thaliana
NP_001043825Oryza sativa Japonica Group
29900.m001540Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF023623.2000000000000003E-20159260IPR003340Transcriptional factor B3
PROSITEPS508630.0159261IPR003340Transcriptional factor B3
PfamPF065077.399999999999996E-30285366IPR010525Auxin response factor