You are querying gene by "AT2G30860".

Locus: AT2G30860 Alias: ATGSTF7

Expression of this gene is regulated by hormone (see microarray data for this gene), but no genetic evidence or Gene Ontology evidence yet supported that this is a hormone-related gene.

Basic gene information ( show / hide contents )

Locus AT2G30860 | Chromosome: 2 | Strand: +
Description Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002).
Alias
ATGSTF7( alias )
ATGSTF9( alias )
GLUTTR( alias )
Gene model
AT2G30860.1 | From: 13146074 | To: 13147322
AT2G30860.2 | From: 13146074 | To: 13147322
Sequence
AT2G30860.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT2G30860.2 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
glutathione transferase activity PMID: 16538523
glutathione peroxidase activity PMID: 16538523
cellular_component
cytoplasm PMID: 12090627
biological_process
toxin catabolic process PMID: 12090627
defense response PMID: 16538523
KEGG pathway This gene participates in 3 pathways:
Pathway Enzyme
Glutathione metabolism glutathione S-transferase
Metabolism of xenobiotics by cytochrome P450 glutathione S-transferase
MAPK signaling pathway glutathione S-transferase
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT2G30860.1 
length: 971 
miRNA : ath-miR1886.1
length: 21 
 
mfe: -25.1 kcal/mol 
p-value: 0.007886 
 
position  17 
target 5' C    C          C      C 
           GAUU UC UCUCACU UCUCUC  
           CUAA AG AGAGUGA AGAGAG  
miRNA  3'         U              U 
 
 
target: AT2G30860.2 
length: 802 
miRNA : ath-miR1886.1
length: 21 
 
mfe: -25.1 kcal/mol 
p-value: 0.006036 
 
position  17 
target 5' C    C          C      C 
           GAUU UC UCUCACU UCUCUC  
           CUAA AG AGAGUGA AGAGAG  
miRNA  3'         U              U 
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_10420
AccessionTaxon
NP_180643 ( AT2G30860 )Arabidopsis thaliana
NP_180644Arabidopsis thaliana
0500010445Ostreococcus tauri
107359Chlamydomonas reinhardtii
188060Chlamydomonas reinhardtii
NP_001043053Oryza sativa Japonica Group
NP_001043056Oryza sativa Japonica Group
NP_001043058Oryza sativa Japonica Group
NP_001043059Oryza sativa Japonica Group
NP_001043061Oryza sativa Japonica Group
NP_001043064Oryza sativa Japonica Group
NP_001043071Oryza sativa Japonica Group
NP_001044339Oryza sativa Japonica Group
estExt_fgenesh1_kg.C_3390002Physcomitrella patens subsp. patens
28961.m000045Ricinus communis
NP_850479Arabidopsis thaliana
NP_001043060Oryza sativa Japonica Group
27923.m000056Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
Gene3DG3DSA:3.40.30.104.0E-20185IPR012335Thioredoxin fold
PROSITEPS504040.0181IPR004045Glutathione S-transferase, N-terminal
SuperFamilySSF528335.8E-23187IPR012336Thioredoxin-like fold
PROSITEPS504040.0181IPR004045Glutathione S-transferase, N-terminal
SuperFamilySSF528335.7E-23187IPR012336Thioredoxin-like fold
Gene3DG3DSA:3.40.30.101.2000011745813983E-19381IPR012335Thioredoxin fold
PfamPF027988.900000000000004E-13675IPR004045Glutathione S-transferase, N-terminal
PfamPF027981.6000000000000009E-12675IPR004045Glutathione S-transferase, N-terminal
SuperFamilySSF476164.1E-1472154IPR010987Glutathione S-transferase, C-terminal-like
SuperFamilySSF476169.6E-3872213IPR010987Glutathione S-transferase, C-terminal-like
Gene3DG3DSA:1.20.1050.105.599999894169869E-3983208IPR010987Glutathione S-transferase, C-terminal-like
Gene3DG3DSA:1.20.1050.103.1E-1187153IPR010987Glutathione S-transferase, C-terminal-like
PROSITEPS504050.088166IPR017933Glutathione S-transferase/chloride channel, C-terminal
PROSITEPS504050.088215IPR017933Glutathione S-transferase/chloride channel, C-terminal
PfamPF000431.2000000000000004E-13119202IPR004046Glutathione S-transferase, C-terminal