You are querying gene by "AT2G30020".

Locus: AT2G30020 Alias: AP2C1

Hormone Evidence Function category Gene Description PMID
abscisic acidMutant Hormone signal transduction Encodes AP2C1. Belongs to the clade B of the PP2C-superfamily. Acts as a MAPK phosphatase that negatively regulates MPK4 and MPK6. 17630279

Basic gene information ( show / hide contents )

Locus AT2G30020 | Chromosome: 2 | Strand: +
Description Encodes AP2C1. Belongs to the clade B of the PP2C-superfamily. Acts as a MAPK phosphatase that negatively regulates MPK4 and MPK6.
Alias
AP2C1( alias )
Gene model
AT2G30020.1 | From: 12821514 | To: 12823165
Sequence
AT2G30020.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
protein serine/threonine phosphatase activity PMID:
cellular_component
protein serine/threonine phosphatase complex PMID:
chloroplast PMID:
biological_process
defense response to fungus PMID: 17630279
response to wounding PMID: 17630279
response to fungus PMID: 17630279
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   abscisic acid   ]

Genotype PMID Type
ap2c1 20488890 mutant
pp2c5 ap2c1 20488890 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT2G30020.1 
length: 1402 
miRNA : ath-miR781
length: 21 
 
mfe: -23.0 kcal/mol 
p-value: 0.052669 
 
position  908 
target 5' G   A         U      C 
           GAG AUCCAGGGA CUUUAG  
           UUC UAGGUCUUU GAGAUU  
miRNA  3' A   A         U        
 
 
Gene1Gene2Positive/NegativeCategoryEnzyme activityEvidencePMID
AT2G30020AT2G43790negativemodification PN/Amutance17630279
AT2G30020AT4G01370negativemodification PN/Amutance17630279

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_43680
AccessionTaxon
NP_172196Arabidopsis thaliana
NP_180563 ( AT2G30020 )Arabidopsis thaliana
NP_001049802Oryza sativa Japonica Group
30079.m000454Ricinus communis
NP_181547Arabidopsis thaliana
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR138321.1999906342183792E-117117394IPR015655Protein phosphatase 2C
SMARTSM003322.9999875044570637E-77127390IPR001932Protein phosphatase 2C-related
SMARTSM003310.05700000217019469135392IPR001932Protein phosphatase 2C-related
PfamPF004815.1000000000000425E-61139385IPR014045Protein phosphatase 2C, N-terminal
Gene3DG3DSA:3.60.40.101.0999918447139768E-69140394IPR001932Protein phosphatase 2C-related
SuperFamilySSF816061.1E-69140393IPR001932Protein phosphatase 2C-related
PROSITEPS010320.0170178IPR000222Protein phosphatase 2C, manganese/magnesium aspartate binding site