You are querying gene by "AT2G26980".

Locus: AT2G26980 Alias: CIPK3

Hormone Evidence Function category Gene Description PMID
cytokininGeneOntology - response to cytokinin stimulus 16212609
abscisic acidMutant Hormone signal transduction encodes a Ser/Thr protein kinase that associates with a calcineurin B-like calcium sensor 12566581
GeneOntology - response to abscisic acid stimulus 12566581

Basic gene information ( show / hide contents )

Locus AT2G26980 | Chromosome: 2 | Strand: -
Description encodes a Ser/Thr protein kinase that associates with a calcineurin B-like calcium sensor
Alias
CIPK3( alias )
SnRK3.17( alias )
Gene model
AT2G26980.3 | From: 11522088 | To: 11525401
AT2G26980.1 | From: 11522089 | To: 11525401
AT2G26980.4 | From: 11521781 | To: 11525583
AT2G26980.2 | From: 11522089 | To: 11525401
AT2G26980.5 | From: 11521781 | To: 11525401
Sequence
AT2G26980.3 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT2G26980.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT2G26980.4 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT2G26980.2 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT2G26980.5 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
protein serine/threonine kinase activity PMID: 12566581
kinase activity PMID:
protein kinase activity PMID: 12566581
cellular_component
nucleus PMID: 15610358
cytoplasm PMID: 15610358
biological_process
abscisic acid mediated signaling PMID: 12566581
response to cytokinin stimulus PMID: 16212609
seed germination PMID: 12566581
response to abiotic stimulus PMID: 12566581
response to abscisic acid stimulus PMID: 12566581
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   abscisic acid   ]

Genotype PMID Type
cipk3 12566581 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT2G26980.1 
length: 1751 
miRNA : ath-miR771
length: 22 
 
mfe: -32.1 kcal/mol 
p-value: 0.006802 
 
position  509 
target 5' A  G   U           A C   A 
           GA GGG CUACCAUAGAG C UCA  
           CU CCC GAUGGUGUCUC G AGU  
miRNA  3' A                  C       
 
 
target: AT2G26980.1 
length: 1751 
miRNA : ath-miR831
length: 22 
 
mfe: -28.6 kcal/mol 
p-value: 0.004295 
 
position  1149 
target 5' U       G C     U       U 
           GAGAGGA G GCGAA GAGAUCA  
           UUCUUCU C UGCUU CUCUAGU  
miRNA  3' G         A               
 
 
target: AT2G26980.2 
length: 1685 
miRNA : ath-miR771
length: 22 
 
mfe: -32.1 kcal/mol 
p-value: 0.006497 
 
position  509 
target 5' A  G   U           A C   A 
           GA GGG CUACCAUAGAG C UCA  
           CU CCC GAUGGUGUCUC G AGU  
miRNA  3' A                  C       
 
 
target: AT2G26980.2 
length: 1685 
miRNA : ath-miR831
length: 22 
 
mfe: -28.6 kcal/mol 
p-value: 0.004089 
 
position  1149 
target 5' U       G C     U       U 
           GAGAGGA G GCGAA GAGAUCA  
           UUCUUCU C UGCUU CUCUAGU  
miRNA  3' G         A               
 
 
target: AT2G26980.3 
length: 1668 
miRNA : ath-miR771
length: 22 
 
mfe: -32.1 kcal/mol 
p-value: 0.006419 
 
position  509 
target 5' A  G   U           A C   A 
           GA GGG CUACCAUAGAG C UCA  
           CU CCC GAUGGUGUCUC G AGU  
miRNA  3' A                  C       
 
 
target: AT2G26980.3 
length: 1668 
miRNA : ath-miR831
length: 22 
 
mfe: -28.6 kcal/mol 
p-value: 0.004036 
 
position  1149 
target 5' U       G C     U       U 
           GAGAGGA G GCGAA GAGAUCA  
           UUCUUCU C UGCUU CUCUAGU  
miRNA  3' G         A               
 
 
target: AT2G26980.4 
length: 1966 
miRNA : ath-miR771
length: 22 
 
mfe: -32.1 kcal/mol 
p-value: 0.007794 
 
position  500 
target 5' A  G   U           A C   A 
           GA GGG CUACCAUAGAG C UCA  
           CU CCC GAUGGUGUCUC G AGU  
miRNA  3' A                  C       
 
 
target: AT2G26980.4 
length: 1966 
miRNA : ath-miR831
length: 22 
 
mfe: -28.6 kcal/mol 
p-value: 0.004971 
 
position  1140 
target 5' U       G C     U       U 
           GAGAGGA G GCGAA GAGAUCA  
           UUCUUCU C UGCUU CUCUAGU  
miRNA  3' G         A               
 
 
target: AT2G26980.5 
length: 2151 
miRNA : ath-miR771
length: 22 
 
mfe: -32.1 kcal/mol 
p-value: 0.008645 
 
position  509 
target 5' A  G   U           A C   A 
           GA GGG CUACCAUAGAG C UCA  
           CU CCC GAUGGUGUCUC G AGU  
miRNA  3' A                  C       
 
 
target: AT2G26980.5 
length: 2151 
miRNA : ath-miR831
length: 22 
 
mfe: -28.6 kcal/mol 
p-value: 0.005556 
 
position  1149 
target 5' U       G C     U       U 
           GAGAGGA G GCGAA GAGAUCA  
           UUCUUCU C UGCUU CUCUAGU  
miRNA  3' G         A               
 
 
Gene1Gene2Positive/NegativeCategoryEnzyme activityEvidencePMID
AT2G26980AT2G47190PositiveotherN/Amutance12566581

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_14263
AccessionTaxon
NP_001031427Arabidopsis thaliana
NP_850092 ( AT2G26980 )Arabidopsis thaliana
NP_850093Arabidopsis thaliana
NP_850094Arabidopsis thaliana
NP_850095Arabidopsis thaliana
NP_850861Arabidopsis thaliana
NP_001049949Oryza sativa Japonica Group
NP_001060689Oryza sativa Japonica Group
NP_001065675Oryza sativa Japonica Group
NP_001066079Oryza sativa Japonica Group
29599.m000169Ricinus communis
30108.m000236Ricinus communis
NP_171622Arabidopsis thaliana
NP_564353Arabidopsis thaliana
NP_849570Arabidopsis thaliana
NP_849571Arabidopsis thaliana
NP_001048828Oryza sativa Japonica Group
NP_001058901Oryza sativa Japonica Group
gw1.13.00.175.1Ostreococcus tauri
e_gw1.15.347.1Physcomitrella patens subsp. patens
estExt_fgenesh1_pm.C_1860009Physcomitrella patens subsp. patens
estExt_fgenesh1_pm.C_580002Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_790185Physcomitrella patens subsp. patens
fgenesh1_pg.scaffold_30000052Physcomitrella patens subsp. patens
112765Chlamydomonas reinhardtii
gw1.17.00.151.1Ostreococcus tauri
DatabaseEntry IDE-valueStartEndInterPro IDDescription
SuperFamilySSF561121.3E-895281IPR011009Protein kinase-like domain
SuperFamilySSF561121.4e-895281IPR011009Protein kinase-like domain
SuperFamilySSF561121.4e-895281IPR011009Protein kinase-like domain
SuperFamilySSF561121.3E-895281IPR011009Protein kinase-like domain
SuperFamilySSF561124e-9110287IPR011009Protein kinase-like domain
PfamPF000693.499999999999955E-7014269IPR017442Serine/threonine-protein kinase-like domain
SMARTSM002202.2999842048856963E-10714269IPR002290Serine/threonine-protein kinase domain
PROSITEPS500110.014269IPR000719Protein kinase, catalytic domain
PfamPF000697e-7314269IPR017442Serine/threonine-protein kinase-like domain
SMARTSM002192.9e-1214268IPR020635Tyrosine-protein kinase, catalytic domain
SMARTSM002203e-10714269IPR002290Serine/threonine-protein kinase domain
PROSITEPS5001151.82014269IPR000719Protein kinase, catalytic domain
PfamPF000696.3e-7314269IPR017442Serine/threonine-protein kinase-like domain
SMARTSM002192.9e-1214268IPR020635Tyrosine-protein kinase, catalytic domain
SMARTSM002203e-10714269IPR002290Serine/threonine-protein kinase domain
PROSITEPS5001151.82014269IPR000719Protein kinase, catalytic domain
PfamPF000693.7000000000000424E-7014269IPR017442Serine/threonine-protein kinase-like domain
SMARTSM002202.2999842048856963E-10714269IPR002290Serine/threonine-protein kinase domain
PROSITEPS500110.014269IPR000719Protein kinase, catalytic domain
PROSITEPS001070.02043IPR017441Protein kinase, ATP binding site
PROSITEPS00107NA2043IPR017441Protein kinase, ATP binding site
PROSITEPS00107NA2043IPR017441Protein kinase, ATP binding site
PROSITEPS001070.02043IPR017441Protein kinase, ATP binding site
PfamPF000697.5e-7324279IPR017442Serine/threonine-protein kinase-like domain
SMARTSM002192.9e-1224278IPR020635Tyrosine-protein kinase, catalytic domain
SMARTSM002203e-10724279IPR002290Serine/threonine-protein kinase domain
PROSITEPS5001151.82024279IPR000719Protein kinase, catalytic domain
PROSITEPS00107NA3053IPR017441Protein kinase, ATP binding site
PANTHERPTHR229820.062371IPR020636Calcium/calmodulin-dependent protein kinase-like
PANTHERPTHR22982:SF450.062371IPR020660CBL-interacting protein kinase
PANTHERPTHR229822.1e-23162433IPR020636Calcium/calmodulin-dependent protein kinase-like
PANTHERPTHR22982:SF452.1e-23162433IPR020660CBL-interacting protein kinase
PANTHERPTHR229829e-21162392IPR020636Calcium/calmodulin-dependent protein kinase-like
PANTHERPTHR22982:SF459e-21162392IPR020660CBL-interacting protein kinase
PANTHERPTHR229820.062371IPR020636Calcium/calmodulin-dependent protein kinase-like
PANTHERPTHR22982:SF450.062371IPR020660CBL-interacting protein kinase
PANTHERPTHR229822.1e-23172443IPR020636Calcium/calmodulin-dependent protein kinase-like
PANTHERPTHR22982:SF452.1e-23172443IPR020660CBL-interacting protein kinase
PROSITEPS001080.0133145IPR008271Serine/threonine-protein kinase, active site
PROSITEPS00108NA133145IPR008271Serine/threonine-protein kinase, active site
PROSITEPS00108NA133145IPR008271Serine/threonine-protein kinase, active site
PROSITEPS001080.0133145IPR008271Serine/threonine-protein kinase, active site
PROSITEPS00108NA143155IPR008271Serine/threonine-protein kinase, active site
PROSITEPS508160.0307331IPR018451NAF/FISL domain
PROSITEPS5081612.993307331IPR018451NAF/FISL domain
PROSITEPS5081612.993307331IPR018451NAF/FISL domain
PROSITEPS508160.0307331IPR018451NAF/FISL domain
PfamPF038221.6999999999999924E-19308368IPR004041NAF domain
PfamPF038222.7e-22308368IPR004041NAF domain
PfamPF038222.5e-22308368IPR004041NAF domain
PfamPF038221.6999999999999924E-19308368IPR004041NAF domain
PROSITEPS5081612.993317341IPR018451NAF/FISL domain
PfamPF038222.8e-22318378IPR004041NAF domain