You are querying gene by "AT2G25490".

Locus: AT2G25490 Alias: EBF1

Hormone Evidence Function category Gene Description PMID
ethyleneTransgenic Hormone signal transduction EIN3 Binding F-box protein;protein binding;ubiquitin-protein ligase activity;negative regulation of ethylene mediated signaling pathway. 15090654 14675532 7768447
Mutant Hormone signal transduction EIN3 Binding F-box protein;protein binding;ubiquitin-protein ligase activity;negative regulation of ethylene mediated signaling pathway. 15090654 14675532 7768447
GeneOntology - negative regulation of ethylene mediated signaling pathway 14675533

Basic gene information ( show / hide contents )

Locus AT2G25490 | Chromosome: 2 | Strand: -
Description EIN3 Binding F-box protein;protein binding;ubiquitin-protein ligase activity;negative regulation of ethylene mediated signaling pathway.
Alias
EBF1( alias )
FBL6( alias )
Gene model
AT2G25490.1 | From: 10854453 | To: 10857610
Sequence
AT2G25490.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
protein binding PMID: 14675532
ubiquitin-protein ligase activity PMID:
cellular_component
nucleus PMID: 14675533
biological_process
negative regulation of ethylene mediated signaling pathway PMID: 14675533
ubiquitin-dependent protein catabolic process PMID: 14675532
response to ethylene stimulus PMID: 14675532
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   ethylene   ]

Genotype PMID Type
EBF1ox 14675532 transgenic
ctr1-1 ebf1-3 17307926 mutant
ebf1-1 14675532 mutant
ebf1-1 ein2-5 14675532 mutant
ebf1-3 15090654 mutant
ebf1-3 ebf2-3 15090654 mutant
ein2-1 ebf1-1 ebf2-1 14675533 mutant
ein3-1 ebf1-3 ebf2-3 17307926 mutant
ein3-1 eil1-3 ebf1-3 ebf2-3 17307926 mutant
ein5-1 ebf1-1 16920797 mutant
ebf1-2 14675532 mutant
ebf1-4 15090654 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT2G25490.1 
length: 2787 
miRNA : ath-miR399f
length: 21 
 
mfe: -29.5 kcal/mol 
p-value: 0.007780 
 
position  1387 
target 5' A     U              A 
           CGGGU GGUCUCUUUUG CA  
           GCCCG UUAGAGGAAAC GU  
miRNA  3' G     U           C    
 
 
target: AT2G25490.1 
length: 2787 
miRNA : ath-miR852
length: 21 
 
mfe: -24.4 kcal/mol 
p-value: 0.044597 
 
position  477 
target 5' G   U U U            G 
           AGA C U AGGCGUUUGUCU  
           UCU G A UCCGCGAAUAGA  
miRNA  3' G   U   U            A 
 
 
Gene1Gene2Positive/NegativeCategoryEnzyme activityEvidencePMID
AT2G25490AT1G73730negativeprotein degradationN/Amutance14675532
AT2G25490AT2G27050negativeprotein degradationN/Amutance14675532
AT2G25490AT3G20770negativeprotein degradationN/Amutance14675532
AT2G25490AT5G10120negativeprotein degradationN/Amutance14675532
AT2G25490AT5G21120negativeprotein degradationN/Amutance14675532
AT2G25490AT5G65100negativeprotein degradationN/Amutance14675532

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_40969
AccessionTaxon
NP_197917Arabidopsis thaliana
NP_565597 ( AT2G25490 )Arabidopsis thaliana
NP_001046222Oryza sativa Japonica Group
e_gw1.188.74.1Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_3520009Physcomitrella patens subsp. patens
28320.m001145Ricinus communis
29848.m004629Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF006460.00770000000000000264105IPR001810F-box domain, cyclin-like
SuperFamilySSF813834.7E-864101IPR022364F-box domain, Skp2-like
SMARTSM002561.8999996417183856E-467106IPR001810F-box domain, cyclin-like
SMARTSM003672.50000086445942E-5228253IPR006553Leucine-rich repeat, cysteine-containing subtype