You are querying gene by "AT2G25000".

Locus: AT2G25000 Alias: ATWRKY60

Hormone Evidence Function category Gene Description PMID
salicylic acidGeneOntology - response to salicylic acid stimulus 12602888

Basic gene information ( show / hide contents )

Locus AT2G25000 | Chromosome: 2 | Strand: +
Description response to salicylic acid stimulus
Alias
ATWRKY60( alias )
WRKY60( alias )
Gene model
AT2G25000.1 | From: 10636829 | To: 10638492
Sequence
AT2G25000.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
transcription factor activity PMID:
cellular_component
nucleus PMID: 16603654
biological_process
defense response to fungus PMID: 16603654
response to salicylic acid stimulus PMID: 12602888
regulation of transcription, DNA-dependent PMID: 10785665
regulation of defense response PMID: 12068113
defense response to bacterium PMID: 12602888
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT2G25000.1 
length: 1209 
miRNA : ath-miR2937
length: 21 
 
mfe: -26.3 kcal/mol 
p-value: 0.012911 
 
position  1112 
target 5' C   G            A   A 
           GCU CUUCGACAGUUU UGU  
           UGA GAAGUUGUCGAG AUA  
miRNA  3' C   G            A     
 
 
target: AT2G25000.1 
length: 1209 
miRNA : ath-miR837-5p
length: 21 
 
mfe: -22.0 kcal/mol 
p-value: 0.060525 
 
position  368 
target 5' G       A A      C     G 
           GAAACGA A CAAGAA UUGAU  
           CUUUGCU U GUUCUU GACUA  
miRNA  3' A                U       
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_69417
AccessionTaxon
NP_001031766Arabidopsis thaliana
NP_180072 ( AT2G25000 )Arabidopsis thaliana
NP_567882Arabidopsis thaliana
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF031065.4e-27145204IPR003657DNA-binding WRKY
SMARTSM007742e-32145205IPR003657DNA-binding WRKY
PROSITEPS5081126.234147206IPR003657DNA-binding WRKY