You are querying gene by "AT2G23460".

Locus: AT2G23460 Alias: ATXLG1

Hormone Evidence Function category Gene Description PMID
abscisic acidGeneOntology - response to abscisic acid stimulus 17999646

Basic gene information ( show / hide contents )

Locus AT2G23460 | Chromosome: 2 | Strand: +
Description response to abscisic acid stimulus
Alias
ATXLG1( alias )
XLG1( alias )
Gene model
AT2G23460.1 | From: 10002558 | To: 10006202
Sequence
AT2G23460.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
signal transducer activity PMID:
cellular_component
nucleus PMID: 17999646
biological_process
G-protein coupled receptor protein signaling pathway PMID:
response to sucrose stimulus PMID: 17999646
response to glucose stimulus PMID: 17999646
response to fructose stimulus PMID: 17999646
root morphogenesis PMID: 17999646
response to abscisic acid stimulus PMID: 17999646
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT2G23460.1 
length: 3065 
miRNA : ath-miR401
length: 21 
 
mfe: -27.0 kcal/mol 
p-value: 0.026191 
 
position  2164 
target 5' U  A  U           A  A  A 
           UG CG GUUGACACCAG UU CG  
           AC GC CAGCUGUGGUC AA GC  
miRNA  3'    A              A       
 
 
target: AT2G23460.1 
length: 3065 
miRNA : ath-miR773
length: 21 
 
mfe: -24.6 kcal/mol 
p-value: 0.075737 
 
position  1530 
target 5' U                C    U 
           GGGGC AAGGCUGGGA UAAG  
           CUCUG UUUCGACCUU GUUU  
miRNA  3'       U          C      
 
 
target: AT2G23460.1 
length: 3065 
miRNA : ath-miR858
length: 21 
 
mfe: -25.8 kcal/mol 
p-value: 0.043085 
 
position  1106 
target 5' G      A       U      A 
           GAGGUU AACAGAU AUGAAG  
           UUCCAG UUGUCUG UGCUUU  
miRNA  3'        C       U        
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_25185
AccessionTaxon
estExt_gwp_gw1.C_1470083Physcomitrella patens subsp. patens
NP_174475Arabidopsis thaliana
NP_565553 ( AT2G23460 )Arabidopsis thaliana
NP_849737Arabidopsis thaliana
NP_001056585Oryza sativa Japonica Group
NP_001067175Oryza sativa Japonica Group
NP_001067461Oryza sativa Japonica Group
28613.m000141Ricinus communis
29676.m001681Ricinus communis
29851.m002477Ricinus communis
30068.m002662Ricinus communis
NP_195165Arabidopsis thaliana
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR102180.0385839IPR001019Guanine nucleotide binding protein (G-protein), alpha subunit
SMARTSM002754.999998119564295E-16468871IPR001019Guanine nucleotide binding protein (G-protein), alpha subunit
PfamPF005031.9000000000000002E-6478551IPR001019Guanine nucleotide binding protein (G-protein), alpha subunit
PRINTSPR003181.0999990912078717E-9485500IPR001019Guanine nucleotide binding protein (G-protein), alpha subunit
SuperFamilySSF478951.4E-20512669IPR011025G protein alpha subunit, helical insertion
Gene3DG3DSA:1.10.400.101.3999989204987674E-9514666IPR011025G protein alpha subunit, helical insertion
PfamPF005033.400000000000038E-35606862IPR001019Guanine nucleotide binding protein (G-protein), alpha subunit
PRINTSPR003181.0999990912078717E-9655677IPR001019Guanine nucleotide binding protein (G-protein), alpha subunit
PRINTSPR003181.0999990912078717E-9725753IPR001019Guanine nucleotide binding protein (G-protein), alpha subunit
PRINTSPR003181.0999990912078717E-9769778IPR001019Guanine nucleotide binding protein (G-protein), alpha subunit