You are querying gene by "AT2G22090".

Locus: AT2G22090 Alias: UBA1A

Hormone Evidence Function category Gene Description PMID
abscisic acidMutant Hormone signal transduction encodes a heterogeneous nuclear single-stranded RNA-binding protein A/B (hnRNP A/B), AAPK-interacting protein1; hnRNPs of the A/B class are involved in alternative pre-mRNA splicing, telomere biogenesis, and mRNA transport. 12181571

Basic gene information ( show / hide contents )

Locus AT2G22090 | Chromosome: 2 | Strand: -
Description encodes a heterogeneous nuclear single-stranded RNA-binding protein A/B (hnRNP A/B), AAPK-interacting protein1; hnRNPs of the A/B class are involved in alternative pre-mRNA splicing, telomere biogenesis, and mRNA transport.
Alias
UBA1A( alias )
Gene model
AT2G22090.2 | From: 9396080 | To: 9397586
AT2G22090.1 | From: 9395340 | To: 9397587
Sequence
AT2G22090.2 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT2G22090.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
RNA binding PMID:
AU-rich element binding PMID: 0012024044
cellular_component
nucleus PMID: 0012024044
biological_process
mRNA stabilization PMID: 0012024044
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   abscisic acid   ]

Genotype PMID Type
akip1 12181571 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

No miRNA interaction information for this gene.

Gene1Gene2Positive/NegativeCategoryEnzyme activityEvidencePMID
AT2G22090MBPKPositivemodification PN/Amutance12181571

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_51846
AccessionTaxon
NP_565450Arabidopsis thaliana
NP_565525Arabidopsis thaliana
NP_565526Arabidopsis thaliana
NP_850021 ( AT2G22090 )Arabidopsis thaliana
DatabaseEntry IDE-valueStartEndInterPro IDDescription
Gene3DG3DSA:3.30.70.3302.800005042611245E-2032195IPR012677Nucleotide-binding, alpha-beta plait
Gene3DG3DSA:3.30.70.3302.7e-2032195IPR012677Nucleotide-binding, alpha-beta plait
PROSITEPS501020.0104181IPR000504RNA recognition motif, RNP-1
PROSITEPS5010215.494104181IPR000504RNA recognition motif, RNP-1
SMARTSM003603.1999989904635046E-20105177IPR000504RNA recognition motif, RNP-1
SMARTSM003603.7e-20105177IPR000504RNA recognition motif, RNP-1
PfamPF000762.800000000000005E-15106173IPR000504RNA recognition motif, RNP-1
PfamPF000763.6e-18106173IPR000504RNA recognition motif, RNP-1