You are querying gene by "AT2G20950".

Locus: AT2G20950 Alias: AT2G20950

Expression of this gene is regulated by hormone (see microarray data for this gene), but no genetic evidence or Gene Ontology evidence yet supported that this is a hormone-related gene.

Basic gene information ( show / hide contents )

Locus AT2G20950 | Chromosome: 2 | Strand: +
Description EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase-like, arabidopsis (InterPro:IPR007942); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G38550.1); Has 386 Blast hits to 377 proteins in 92 species: Archae - 7; Bacteria - 14; Metazoa - 202; Fungi - 67; Plants - 80; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink).
Alias
AT2G20950( alias )
Gene model
AT2G20950.1 | From: 9010216 | To: 9013019
AT2G20950.3 | From: 9010220 | To: 9013019
AT2G20950.4 | From: 9010220 | To: 9013019
AT2G20950.2 | From: 9010216 | To: 9013019
Sequence
AT2G20950.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT2G20950.3 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT2G20950.4 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT2G20950.2 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene OntologyNo GO annotation data for this gene
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT2G20950.1 
length: 2234 
miRNA : ath-miR781
length: 21 
 
mfe: -22.8 kcal/mol 
p-value: 0.105308 
 
position  359 
target 5' C    C    U            U 
           UGAG GUCC AGAGAGC CUGA  
           AUUC UAGG UCUUUUG GAUU  
miRNA  3'      A            A      
 
 
target: AT2G20950.2 
length: 2183 
miRNA : ath-miR781
length: 21 
 
mfe: -22.8 kcal/mol 
p-value: 0.102507 
 
position  359 
target 5' C    C    U            U 
           UGAG GUCC AGAGAGC CUGA  
           AUUC UAGG UCUUUUG GAUU  
miRNA  3'      A            A      
 
 
target: AT2G20950.3 
length: 2185 
miRNA : ath-miR781
length: 21 
 
mfe: -22.8 kcal/mol 
p-value: 0.102617 
 
position  355 
target 5' C    C    U            U 
           UGAG GUCC AGAGAGC CUGA  
           AUUC UAGG UCUUUUG GAUU  
miRNA  3'      A            A      
 
 
target: AT2G20950.4 
length: 2260 
miRNA : ath-miR781
length: 21 
 
mfe: -22.8 kcal/mol 
p-value: 0.106734 
 
position  355 
target 5' C    C    U            U 
           UGAG GUCC AGAGAGC CUGA  
           AUUC UAGG UCUUUUG GAUU  
miRNA  3'      A            A      
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_32870
AccessionTaxon
NP_179692Arabidopsis thaliana
NP_001078512Arabidopsis thaliana
NP_195567Arabidopsis thaliana
NP_195568Arabidopsis thaliana
NP_196675Arabidopsis thaliana
NP_850008 ( AT2G20950 )Arabidopsis thaliana
NP_973499Arabidopsis thaliana
NP_973500Arabidopsis thaliana
NP_973501Arabidopsis thaliana
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF052783.7000000000000424E-97236528IPR007942Phospholipase-like, arabidopsis
PfamPF052783.300000000000019E-103236501IPR007942Phospholipase-like, arabidopsis
PfamPF052783.300000000000019E-103238503IPR007942Phospholipase-like, arabidopsis
PfamPF052783.6000000000000226E-103253518IPR007942Phospholipase-like, arabidopsis