You are querying gene by "AT2G18960".

Locus: AT2G18960 Alias: AHA1

Hormone Evidence Function category Gene Description PMID
abscisic acidGeneOntology - response to abscisic acid stimulus 0012047634

Basic gene information ( show / hide contents )

Locus AT2G18960 | Chromosome: 2 | Strand: +
Description response to abscisic acid stimulus
Alias
AHA1( alias )
OST2( alias )
PMA( alias )
Gene model
AT2G18960.1 | From: 8228713 | To: 8234701
Sequence
AT2G18960.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
protein binding PMID: 12182706
hydrogen-exporting ATPase activity, phosphorylative mechanism PMID: 8300635
ATPase activity PMID:
cellular_component
membrane PMID: 2521951
plasma membrane PMID: 16618929
biological_process
response to water deprivation PMID: 0012047634
regulation of stomatal movement PMID: 0012047634
proton transport PMID: 8300635
response to abscisic acid stimulus PMID: 0012047634
KEGG pathway This gene participates in 2 pathways:
Pathway Enzyme
Oxidative phosphorylation H+-transporting ATPase
ATPases H+-transporting ATPase
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT2G18960.1 
length: 3431 
miRNA : ath-miR172b*
length: 20 
 
mfe: -22.9 kcal/mol 
p-value: 0.037153 
 
position  2479 
target 5' A            G       G 
           UGAA C UAAUG GUGCUGU  
           ACUU G AUUAC CACGACG  
miRNA  3' C    A A               
 
 
target: AT2G18960.1 
length: 3431 
miRNA : ath-miR417
length: 21 
 
mfe: -23.9 kcal/mol 
p-value: 0.033501 
 
position  1401 
target 5' A  A  G         U     C 
           UC GA AGGUUCACU CCUUC  
           AG UU UUUAAGUGA GGAAG  
miRNA  3'    C  G         U       
 
 
target: AT2G18960.1 
length: 3431 
miRNA : ath-miR419
length: 21 
 
mfe: -29.0 kcal/mol 
p-value: 0.006402 
 
position  2234 
target 5' U                    U 
           GAC UUCUCAGCGUUCAUGG  
           UUG AGGAGUCGUAAGUAUU  
miRNA  3' G   U                  
 
 
target: AT2G18960.1 
length: 3431 
miRNA : ath-miR837-5p
length: 21 
 
mfe: -21.5 kcal/mol 
p-value: 0.178427 
 
position  1883 
target 5' G   U   U      G      G 
           GAG UGA CGAGAA GCUGAU  
           CUU GCU GUUCUU UGACUA  
miRNA  3' A   U   U               
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_10717
AccessionTaxon
NP_173169Arabidopsis thaliana
NP_178181Arabidopsis thaliana
NP_178762Arabidopsis thaliana
NP_179486 ( AT2G18960 )Arabidopsis thaliana
NP_180028Arabidopsis thaliana
NP_189850Arabidopsis thaliana
NP_190378Arabidopsis thaliana
NP_191592Arabidopsis thaliana
NP_194748Arabidopsis thaliana
NP_200545Arabidopsis thaliana
NP_201073Arabidopsis thaliana
182602Chlamydomonas reinhardtii
38137Chlamydomonas reinhardtii
54949Chlamydomonas reinhardtii
NP_001048395Oryza sativa Japonica Group
NP_001048647Oryza sativa Japonica Group
NP_001049185Oryza sativa Japonica Group
NP_001050947Oryza sativa Japonica Group
NP_001054118Oryza sativa Japonica Group
NP_001055186Oryza sativa Japonica Group
NP_001056980Oryza sativa Japonica Group
NP_001059093Oryza sativa Japonica Group
NP_001061339Oryza sativa Japonica Group
NP_001067382Oryza sativa Japonica Group
gw1.06.00.30.1Ostreococcus tauri
e_gw1.404.27.1Physcomitrella patens subsp. patens
27401.m000290Ricinus communis
29588.m000874Ricinus communis
29737.m001242Ricinus communis
29822.m003460Ricinus communis
29848.m004445Ricinus communis
29884.m000180Ricinus communis
30147.m014059Ricinus communis
30174.m008765Ricinus communis
30182.m000136Ricinus communis
estExt_gwp_gw1.C_3210018Physcomitrella patens subsp. patens
NP_192910Arabidopsis thaliana
29810.m000144Ricinus communis
estExt_fgenesh2_pg.C_1370088Physcomitrella patens subsp. patens
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR119390.05697IPR001757ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter
PANTHERPTHR11939:SF610.05697IPR006534ATPase, P-type, plasma-membrane proton-efflux
SMARTSM008315.5999998941702305E-191385IPR004014ATPase, P-type cation-transporter, N-terminal
PfamPF006901.9999999999999993E-91679IPR004014ATPase, P-type cation-transporter, N-terminal
TIGRFAMTIGR016470.032804IPR006534ATPase, P-type, plasma-membrane proton-efflux
PfamPF001228.100000000000005E-5798319IPR008250ATPase, P-type, ATPase-associated domain
TIGRFAMTIGR014941.6000024069599662E-1798216IPR001757ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter
PRINTSPR001193.299990775033228E-42177191IPR001757ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter
PfamPF007025.200000000000011E-16323600IPR005834Haloacid dehalogenase-like hydrolase
PRINTSPR001193.299990775033228E-42327341IPR001757ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter
PROSITEPS001540.0329335IPR018303ATPase, P-type phosphorylation site
PRINTSPR001201.1000015067164283E-58443461IPR000695ATPase, P-type, H+ transporting proton pump
PRINTSPR001193.299990775033228E-42481492IPR001757ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter
PRINTSPR001193.299990775033228E-42503513IPR001757ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter
PRINTSPR001201.1000015067164283E-58558574IPR000695ATPase, P-type, H+ transporting proton pump
TIGRFAMTIGR014941.5000030697110435E-29561677IPR001757ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter
PRINTSPR001193.299990775033228E-42586605IPR001757ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter
PRINTSPR001201.1000015067164283E-58586602IPR000695ATPase, P-type, H+ transporting proton pump
PRINTSPR001193.299990775033228E-42609621IPR001757ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter
PRINTSPR001201.1000015067164283E-58617642IPR000695ATPase, P-type, H+ transporting proton pump
PRINTSPR001201.1000015067164283E-58758779IPR000695ATPase, P-type, H+ transporting proton pump