You are querying gene by "AT2G18470".

Locus: AT2G18470 Alias: PERK4

Hormone Evidence Function category Gene Description PMID
abscisic acidMutant Hormone signal transduction Proline-rich extensin-like receptor kinase 4. Functions at an early stage of ABA signalling inhibiting primary root cell elongation by perturbing Ca2+ homeostasis. 19566594

Basic gene information ( show / hide contents )

Locus AT2G18470 | Chromosome: 2 | Strand: -
Description Proline-rich extensin-like receptor kinase 4. Functions at an early stage of ABA signalling inhibiting primary root cell elongation by perturbing Ca2+ homeostasis.
Alias
PERK4( alias )
Gene model
AT2G18470.1 | From: 8012367 | To: 8015134
Sequence
AT2G18470.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
ATP binding PMID:
protein kinase activity PMID:
cellular_component
chloroplast PMID:
biological_process
protein amino acid phosphorylation PMID:
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   abscisic acid   ]

Genotype PMID Type
perk4-1 19566594 mutant
perk4-2 19566594 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT2G18470.1 
length: 2016 
miRNA : ath-miR396a
length: 21 
 
mfe: -25.6 kcal/mol 
p-value: 0.026086 
 
position  783 
target 5' U             G     C 
           GGUU GGGGAGGC GUGGA  
           UCAA UUCUUUCG CACCU  
miRNA  3' G    G        A     U 
 
 
target: AT2G18470.1 
length: 2016 
miRNA : ath-miR396b
length: 21 
 
mfe: -25.0 kcal/mol 
p-value: 0.030229 
 
position  783 
target 5' U             G     C 
           GGUU GGGGAGGC GUGGA  
           UCAA UUCUUUCG CACCU  
miRNA  3' U    G        A     U 
 
 
target: AT2G18470.1 
length: 2016 
miRNA : ath-miR838
length: 21 
 
mfe: -26.9 kcal/mol 
p-value: 0.007582 
 
position  526 
target 5' A   G            U   A 
           GUG AGGAGGUGGAGG GGA  
           CAC UUCUUCAUCUUC UUU  
miRNA  3' A   G            U     
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_27664
AccessionTaxon
NP_175353Arabidopsis thaliana
NP_179437 ( AT2G18470 )Arabidopsis thaliana
NP_188511Arabidopsis thaliana
NP_189098Arabidopsis thaliana
NP_195170Arabidopsis thaliana
NP_001042469Oryza sativa Japonica Group
29634.m002132Ricinus communis
29912.m005515Ricinus communis
30190.m010888Ricinus communis
NP_001044255Oryza sativa Japonica Group
NP_001056045Oryza sativa Japonica Group
DatabaseEntry IDE-valueStartEndInterPro IDDescription
SuperFamilySSF561129.4E-77254556IPR011009Protein kinase-like domain
PROSITEPS500110.0284562IPR000719Protein kinase, catalytic domain
PfamPF077141.0999999999999872E-41288555IPR001245Serine-threonine/tyrosine-protein kinase
PROSITEPS001070.0290312IPR017441Protein kinase, ATP binding site
PROSITEPS001080.0404416IPR008271Serine/threonine-protein kinase, active site