You are querying gene by "AT2G18300".

Locus: AT2G18300 Alias: AT2G18300

Hormone Evidence Function category Gene Description PMID
cytokininGeneOntology - response to cytokinin stimulus 16212609

Basic gene information ( show / hide contents )

Locus AT2G18300 | Chromosome: 2 | Strand: -
Description response to cytokinin stimulus
Alias
AT2G18300( alias )
Gene model
AT2G18300.1 | From: 7959749 | To: 7961649
AT2G18300.2 | From: 7959749 | To: 7961649
Sequence
AT2G18300.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT2G18300.2 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
transcription factor activity PMID: 12679534
cellular_component
nucleus PMID:
biological_process
response to cytokinin stimulus PMID: 16212609
regulation of transcription PMID: 11118137
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT2G18300.1 
length: 1484 
miRNA : ath-miR776
length: 21 
 
mfe: -22.8 kcal/mol 
p-value: 0.029146 
 
position  627 
target 5' A        A         C   G 
           GACAUCGA AGGAG CUU AGA  
           UUGUAGUU UCUUC GAA UCU  
miRNA  3'          A     U         
 
 
target: AT2G18300.2 
length: 1490 
miRNA : ath-miR776
length: 21 
 
mfe: -22.8 kcal/mol 
p-value: 0.029314 
 
position  627 
target 5' A        A         C   G 
           GACAUCGA AGGAG CUU AGA  
           UUGUAGUU UCUUC GAA UCU  
miRNA  3'          A     U         
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_58892
AccessionTaxon
NP_195372Arabidopsis thaliana
NP_565434 ( AT2G18300 )Arabidopsis thaliana
NP_849508Arabidopsis thaliana
NP_849976Arabidopsis thaliana
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PROSITEPS5088811.161185242IPR001092Helix-loop-helix DNA-binding domain
PROSITEPS508880.0185242IPR001092Helix-loop-helix DNA-binding domain
Gene3DG3DSA:4.10.280.101.6e-08187268IPR011598Helix-loop-helix DNA-binding
SuperFamilySSF474595.6e-15187262IPR011598Helix-loop-helix DNA-binding
Gene3DG3DSA:4.10.280.101.6999992228405135E-8187268IPR011598Helix-loop-helix DNA-binding
SuperFamilySSF474595.6E-15187262IPR011598Helix-loop-helix DNA-binding
PfamPF000105.3e-06196242IPR001092Helix-loop-helix DNA-binding domain
PfamPF000100.004199999999999998196242IPR001092Helix-loop-helix DNA-binding domain
SMARTSM003533.4e-08197247IPR001092Helix-loop-helix DNA-binding domain
SMARTSM003532.9000003626990767E-8197247IPR001092Helix-loop-helix DNA-binding domain