You are querying gene by "AT2G16580".

Locus: AT2G16580 Alias: AT2G16580

Hormone Evidence Function category Gene Description PMID
auxinGeneOntology - response to auxin stimulus

Basic gene information ( show / hide contents )

Locus AT2G16580 | Chromosome: 2 | Strand: -
Description response to auxin stimulus
Alias
AT2G16580( alias )
Gene model
AT2G16580.1 | From: 7191504 | To: 7194050
Sequence
AT2G16580.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
molecular_function_unknown PMID:
biological_process
response to auxin stimulus PMID:
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT2G16580.1 
length: 893 
miRNA : ath-miR1888
length: 21 
 
mfe: -23.2 kcal/mol 
p-value: 0.003905 
 
position  235 
target 5' U     G  C           C 
           UUCUU AC AAUCUUGACUU  
           AAGAA UG UUAGAAUUGAA  
miRNA  3'       G  U           U 
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_25716
AccessionTaxon
NP_173411Arabidopsis thaliana
NP_177688Arabidopsis thaliana
NP_179248 ( AT2G16580 )Arabidopsis thaliana
NP_179392Arabidopsis thaliana
NP_179718Arabidopsis thaliana
NP_195202Arabidopsis thaliana
NP_195334Arabidopsis thaliana
NP_195597Arabidopsis thaliana
NP_201427Arabidopsis thaliana
NP_001046748Oryza sativa Japonica Group
NP_001046749Oryza sativa Japonica Group
NP_190688Arabidopsis thaliana
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF025194.0000000000000056E-2425108IPR003676Auxin responsive SAUR protein