You are querying gene by "AT2G14960".

Locus: AT2G14960 Alias: GH3.1

Hormone Evidence Function category Gene Description PMID
auxinGeneOntology - response to auxin stimulus 15659623

Basic gene information ( show / hide contents )

Locus AT2G14960 | Chromosome: 2 | Strand: -
Description response to auxin stimulus
Alias
GH3.1( alias )
Gene model
AT2G14960.1 | From: 6458454 | To: 6460752
Sequence
AT2G14960.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
molecular_function_unknown PMID:
cellular_component
cellular_component_unknown PMID:
biological_process
response to auxin stimulus PMID: 15659623
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT2G14960.1 
length: 2060 
miRNA : ath-miR396b
length: 21 
 
mfe: -24.0 kcal/mol 
p-value: 0.051841 
 
position  1320 
target 5' A   C           G      A 
           GAG UUCAA AAGGC GUGGAG  
           UUC AAGUU UUUCG CACCUU  
miRNA  3'           C     A        
 
 
target: AT2G14960.1 
length: 2060 
miRNA : ath-miR408
length: 21 
 
mfe: -30.0 kcal/mol 
p-value: 0.011438 
 
position  1452 
target 5' A  G     U     G      G 
           GU AGGGA GGGGC AG GCA  
           CG UCCCU CUCCG UC CGU  
miRNA  3'    G     U        A   A 
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_14809
AccessionTaxon
NP_001031874Arabidopsis thaliana
NP_174134Arabidopsis thaliana
NP_196839Arabidopsis thaliana
NP_196840Arabidopsis thaliana
NP_196841Arabidopsis thaliana
NP_196842Arabidopsis thaliana
NP_001044345Oryza sativa Japonica Group
NP_001044467Oryza sativa Japonica Group
NP_001055967Oryza sativa Japonica Group
NP_001060084Oryza sativa Japonica Group
NP_001060085Oryza sativa Japonica Group
NP_001060163Oryza sativa Japonica Group
27533.m000079Ricinus communis
28152.m000872Ricinus communis
29970.m001008Ricinus communis
30128.m008575Ricinus communis
30129.m000366Ricinus communis
NP_173729Arabidopsis thaliana
NP_175299Arabidopsis thaliana
NP_196836Arabidopsis thaliana
NP_199960Arabidopsis thaliana
NP_176159Arabidopsis thaliana
NP_179101 ( AT2G14960 )Arabidopsis thaliana
NP_179898Arabidopsis thaliana
NP_182296Arabidopsis thaliana
NP_194456Arabidopsis thaliana
NP_195455Arabidopsis thaliana
NP_200262Arabidopsis thaliana
NP_849718Arabidopsis thaliana
estExt_Genewise1.C_3230045Physcomitrella patens subsp. patens
NP_175300Arabidopsis thaliana
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF033210.021564IPR004993GH3 auxin-responsive promoter