You are querying gene by "AT2G06850".

Locus: AT2G06850 Alias: EXGT-A1

Hormone Evidence Function category Gene Description PMID
auxinGeneOntology - response to auxin stimulus 8696366

Basic gene information ( show / hide contents )

Locus AT2G06850 | Chromosome: 2 | Strand: +
Description response to auxin stimulus
Alias
EXGT-A1( alias )
EXT( alias )
Gene model
AT2G06850.1 | From: 2763523 | To: 2765717
Sequence
AT2G06850.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
xyloglucan:xyloglucosyl transferase activity PMID: 8696366
hydrolase activity, acting on glycosyl bonds PMID:
cellular_component
plant-type cell wall PMID: 16287169
cell wall PMID: 15610358
extracellular region PMID: 1400418
cytoplasm PMID: 15610358
biological_process
unidimensional cell growth PMID: 10557219
response to auxin stimulus PMID: 8696366
response to mechanical stimulus PMID: 8696366
response to low light intensity PMID: 8696366
KEGG pathway This gene participates in 1 pathways:
Pathway Enzyme
Other enzymes xyloglucan:xyloglucosyl transferase
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT2G06850.1 
length: 1214 
miRNA : ath-miR158a
length: 20 
 
mfe: -23.1 kcal/mol 
p-value: 0.006454 
 
position  1083 
target 5' A     A              C 
           UGUUU UG CUAUAUUUGGG  
           ACGAA AC GAUGUAAACCC  
miRNA  3'          A           U 
 
 
target: AT2G06850.1 
length: 1214 
miRNA : ath-miR158b
length: 20 
 
mfe: -23.3 kcal/mol 
p-value: 0.002439 
 
position  1083 
target 5' A     A              C 
           UGUUU UG CUAUAUUUGGG  
           ACGAA AC GAUGUAAACCC  
miRNA  3'          A           C 
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

No related Ortholog Groups information for this gene.

DatabaseEntry IDE-valueStartEndInterPro IDDescription
PIRPIRSF0056040.01295IPR016455Xyloglucan endotransglucosylase/hydrolase
Gene3DG3DSA:2.60.120.2001.799997540223361E-10819296IPR013320Concanavalin A-like lectin/glucanase, subgroup
SuperFamilySSF498997.2E-10430296IPR008985Concanavalin A-like lectin/glucanase
PfamPF007224.3999999999999654E-5736215IPR000757Glycoside hydrolase, family 16
PRINTSPR007376.80000200614765E-56785IPR008264Beta-glucanase
PROSITEPS010340.0109119IPR008263Glycoside hydrolase, family 16, active site
PRINTSPR007376.80000200614765E-5125138IPR008264Beta-glucanase
PRINTSPR007376.80000200614765E-5143160IPR008264Beta-glucanase
PfamPF069551.6000000000000009E-16240290IPR010713Xyloglucan endo-transglycosylase, C-terminal