You are querying gene by "AT2G06050".

Locus: AT2G06050 Alias: OPR3

Hormone Evidence Function category Gene Description PMID
gibberellinTransgenic Hormone signal transduction Encodes a 12-oxophytodienoate reductase that is required for jasmonate biosynthesis. Mutants are male sterile and defective in pollen dehiscence. 19325888
jasmonic acidTransgenic Hormone biosynthesis Encodes a 12-oxophytodienoate reductase that is required for jasmonate biosynthesis. Mutants are male sterile and defective in pollen dehiscence. 10973494 10899973
Mutant Hormone biosynthesis Encodes a 12-oxophytodienoate reductase that is required for jasmonate biosynthesis. Mutants are male sterile and defective in pollen dehiscence. 10973494 10899973
GeneOntology - jasmonic acid biosynthetic process 10973494

Basic gene information ( show / hide contents )

Locus AT2G06050 | Chromosome: 2 | Strand: -
Description Encodes a 12-oxophytodienoate reductase that is required for jasmonate biosynthesis. Mutants are male sterile and defective in pollen dehiscence.
Alias
OPR3( alias )
Gene model
AT2G06050.2 | From: 2359112 | To: 2362177
AT2G06050.1 | From: 2359111 | To: 2362299
AT2G06050.3 | From: 2359237 | To: 2362115
Sequence
AT2G06050.2 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT2G06050.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT2G06050.3 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
12-oxophytodienoate reductase activity PMID: 11094980
biological_process
response to wounding PMID: 11094980
jasmonic acid biosynthetic process PMID: 10973494
response to ozone PMID: 16262714
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

  gibberellin     jasmonic acid  

[   gibberellin   ]

Genotype PMID Type
opr3 MYB21-OE1 19325888 transgenic

[   jasmonic acid   ]

Genotype PMID Type
dde1/opr3 10899973 10973494 mutant
opr3 MYB21-OE1 19325888 transgenic

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT2G06050.1 
length: 1490 
miRNA : ath-miR844*
length: 21 
 
mfe: -26.3 kcal/mol 
p-value: 0.002236 
 
position  1109 
target 5' G    U                U 
           AGCU G AGGAUGGCUUAUAA  
           UUGA C UUCUACCGAAUAUU  
miRNA  3'      U A                
 
 
target: AT2G06050.2 
length: 1510 
miRNA : ath-miR844*
length: 21 
 
mfe: -26.3 kcal/mol 
p-value: 0.002286 
 
position  1130 
target 5' G    U                U 
           AGCU G AGGAUGGCUUAUAA  
           UUGA C UUCUACCGAAUAUU  
miRNA  3'      U A                
 
 
target: AT2G06050.3 
length: 1233 
miRNA : ath-miR844*
length: 21 
 
mfe: -26.3 kcal/mol 
p-value: 0.001623 
 
position  978 
target 5' G    U                U 
           AGCU G AGGAUGGCUUAUAA  
           UUGA C UUCUACCGAAUAUU  
miRNA  3'      U A                
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_10276
AccessionTaxon
NP_177794Arabidopsis thaliana
NP_177795Arabidopsis thaliana
NP_974157Arabidopsis thaliana
NP_001057139Oryza sativa Japonica Group
NP_001057140Oryza sativa Japonica Group
NP_001057141Oryza sativa Japonica Group
NP_001057144Oryza sativa Japonica Group
NP_001057145Oryza sativa Japonica Group
e_gw1.326.36.1Physcomitrella patens subsp. patens
e_gw1.93.132.1Physcomitrella patens subsp. patens
estExt_fgenesh1_pg.C_10231Physcomitrella patens subsp. patens
estExt_fgenesh1_pg.C_90063Physcomitrella patens subsp. patens
121264Chlamydomonas reinhardtii
132041Chlamydomonas reinhardtii
NP_001061975Oryza sativa Japonica Group
estExt_fgenesh1_pg.C_620077Physcomitrella patens subsp. patens
29739.m003772Ricinus communis
NP_001047148Oryza sativa Japonica Group
NP_001077884 ( AT2G06050 )Arabidopsis thaliana
NP_178662Arabidopsis thaliana
NP_973431Arabidopsis thaliana
29907.m000654Ricinus communis
192522Chlamydomonas reinhardtii
34907.m000028Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
Gene3DG3DSA:3.20.20.703.6e-11112385IPR013785Aldolase-type TIM barrel
PfamPF007242.6e-8412358IPR001155NADH:flavin oxidoreductase/NADH oxidase, N-terminal