You are querying gene by "AT2G04880".

Locus: AT2G04880 Alias: ATWRKY1

Hormone Evidence Function category Gene Description PMID
salicylic acidGeneOntology - salicylic acid mediated signaling pathway 17264121

Basic gene information ( show / hide contents )

Locus AT2G04880 | Chromosome: 2 | Strand: +
Description salicylic acid mediated signaling pathway
ATWRKY1( alias )
WRKY1( alias )
ZAP1( alias )
Gene model
AT2G04880.1 | From: 1717885 | To: 1720523
AT2G04880.2 | From: 1717885 | To: 1720523
AT2G04880.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT2G04880.2 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
zinc ion binding PMID: 17264121
transcription activator activity PMID: 8972846
transcription factor activity PMID:
nucleus PMID:
salicylic acid mediated signaling pathway PMID: 17264121
positive regulation of transcription PMID: 8972846
regulation of transcription, DNA-dependent PMID: 10785665
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

Hormone treatment related datasets  
Abiotic stress treatment related datasets (in root)  
Abiotic stress treatment related datasets (in shoot)  
Development related datasets  

miRNA interaction information for this gene

(Note:target use cDNA sequence)
target: AT2G04880.1 
length: 2028 
miRNA : ath-miR407
length: 21 
mfe: -20.2 kcal/mol 
p-value: 0.017020 
position  1968 
target 5' C  G    U             U 
miRNA  3'    G                  U 
target: AT2G04880.2 
length: 1956 
miRNA : ath-miR407
length: 21 
mfe: -20.2 kcal/mol 
p-value: 0.016317 
position  1896 
target 5' C  G    U             U 
miRNA  3'    G                  U 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_69894
NP_178565 ( AT2G04880 )Arabidopsis thaliana
NP_849936Arabidopsis thaliana
29949.m000123Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PROSITEPS5081122.492105169IPR003657DNA-binding WRKY
PROSITEPS5081122.492105169IPR003657DNA-binding WRKY
PfamPF031065.9e-28110168IPR003657DNA-binding WRKY
SMARTSM007746.3e-35110168IPR003657DNA-binding WRKY
PfamPF031065.5e-28110168IPR003657DNA-binding WRKY
SMARTSM007746.3e-35110168IPR003657DNA-binding WRKY
PROSITEPS5081134.888277342IPR003657DNA-binding WRKY
PfamPF031063.3e-31282340IPR003657DNA-binding WRKY
SMARTSM007742.2e-39282341IPR003657DNA-binding WRKY
PROSITEPS5081134.888301366IPR003657DNA-binding WRKY
PfamPF031063.6e-31306364IPR003657DNA-binding WRKY
SMARTSM007742.2e-39306365IPR003657DNA-binding WRKY