You are querying gene by "AT2G04160".

Locus: AT2G04160 Alias: AIR3

Hormone Evidence Function category Gene Description PMID
auxinGeneOntology - response to auxin stimulus 10080694

Basic gene information ( show / hide contents )

Locus AT2G04160 | Chromosome: 2 | Strand: -
Description response to auxin stimulus
Alias
AIR3( alias )
Gene model
AT2G04160.1 | From: 1401273 | To: 1407742
Sequence
AT2G04160.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
subtilisin activity PMID: 10080694
subtilase activity PMID:
cellular_component
endomembrane system PMID:
biological_process
response to auxin stimulus PMID: 10080694
proteolysis PMID:
lateral root morphogenesis PMID: 10080694
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT2G04160.1 
length: 2552 
miRNA : ath-miR407
length: 21 
 
mfe: -19.2 kcal/mol 
p-value: 0.040121 
 
position  2289 
target 5' G        C             G 
           GCUAAGGG UAUGUG UUUGGA  
           UGGUUUUC AUAUAC AAAUUU  
miRNA  3'                 U        
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_12039
AccessionTaxon
NP_199377Arabidopsis thaliana
NP_199378Arabidopsis thaliana
28525.m000260Ricinus communis
28525.m000261Ricinus communis
29805.m001529Ricinus communis
29822.m003382Ricinus communis
29836.m000560Ricinus communis
29836.m000566Ricinus communis
30005.m001271Ricinus communis
30026.m001511Ricinus communis
NP_200789Arabidopsis thaliana
NP_565309 ( AT2G04160 )Arabidopsis thaliana
NP_001043993Oryza sativa Japonica Group
NP_001046210Oryza sativa Japonica Group
NP_001050634Oryza sativa Japonica Group
NP_001061553Oryza sativa Japonica Group
NP_001063483Oryza sativa Japonica Group
e_gw1.19.32.1Physcomitrella patens subsp. patens
estExt_Genewise1.C_280065Physcomitrella patens subsp. patens
fgenesh1_pm.scaffold_218000016Physcomitrella patens subsp. patens
29172.m000220Ricinus communis
NP_563639Arabidopsis thaliana
NP_568765Arabidopsis thaliana
NP_569048Arabidopsis thaliana
NP_001048300Oryza sativa Japonica Group
NP_001048301Oryza sativa Japonica Group
NP_001048303Oryza sativa Japonica Group
NP_001049524Oryza sativa Japonica Group
NP_001051353Oryza sativa Japonica Group
NP_001053614Oryza sativa Japonica Group
NP_001061952Oryza sativa Japonica Group
NP_001063283Oryza sativa Japonica Group
NP_001064523Oryza sativa Japonica Group
estExt_fgenesh1_pg.C_1700014Physcomitrella patens subsp. patens
28348.m000079Ricinus communis
29637.m000731Ricinus communis
29739.m003750Ricinus communis
29956.m000104Ricinus communis
30147.m014151Ricinus communis
30170.m013762Ricinus communis
30174.m008941Ricinus communis
30190.m011086Ricinus communis
NP_563701Arabidopsis thaliana
NP_565330Arabidopsis thaliana
NP_566483Arabidopsis thaliana
NP_566473Arabidopsis thaliana
NP_567972Arabidopsis thaliana
186461Chlamydomonas reinhardtii
NP_001047665Oryza sativa Japonica Group
NP_001053536Oryza sativa Japonica Group
NP_001060094Oryza sativa Japonica Group
30190.m011072Ricinus communis
30190.m011075Ricinus communis
30190.m011077Ricinus communis
30190.m011078Ricinus communis
30190.m011082Ricinus communis
30190.m011084Ricinus communis
30190.m011085Ricinus communis
NP_001066666Oryza sativa Japonica Group
NP_001065109Oryza sativa Japonica Group
NP_001048778Oryza sativa Japonica Group
NP_001053537Oryza sativa Japonica Group
estExt_gwp_gw1.C_700162Physcomitrella patens subsp. patens
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR107950.028772IPR015500Peptidase S8, subtilisin-related
SuperFamilySSF548975.7E-729116IPR009020Proteinase inhibitor, propeptide
PfamPF059224.500000000000003E-1231116IPR010259Proteinase inhibitor I9, subtilisin propeptide
SuperFamilySSF527435.7E-75114633IPR000209Peptidase S8/S53, subtilisin/kexin/sedolisin
Gene3DG3DSA:3.40.50.2007.499996058513585E-68124629IPR000209Peptidase S8/S53, subtilisin/kexin/sedolisin
PfamPF000829.600000000000035E-26129610IPR000209Peptidase S8/S53, subtilisin/kexin/sedolisin
PRINTSPR007236.20000124972815E-11144163IPR000209Peptidase S8/S53, subtilisin/kexin/sedolisin
PRINTSPR007236.20000124972815E-11219232IPR000209Peptidase S8/S53, subtilisin/kexin/sedolisin
PfamPF022252.3000000000000007E-7398480IPR003137Protease-associated PA
PRINTSPR007236.20000124972815E-11558574IPR000209Peptidase S8/S53, subtilisin/kexin/sedolisin
PROSITEPS001380.0559569IPR022398Peptidase S8/S53, subtilisin, active site