You are querying gene by "AT2G02950".

Locus: AT2G02950 Alias: PKS1

Hormone Evidence Function category Gene Description PMID
auxinTransgenic Hormone signal transduction Encodes a basic soluble protein which can independently bind to either PHYA or PHYB, regardless of whether the phytochromes are in the Pr or Pfr state. PKS1 can be phosphorylated by oat phyA in vitro in a light regulated manner. It is postulated to be a negative regulator of phyB signalling. 20071603
Mutant Hormone signal transduction Encodes a basic soluble protein which can independently bind to either PHYA or PHYB, regardless of whether the phytochromes are in the Pr or Pfr state. PKS1 can be phosphorylated by oat phyA in vitro in a light regulated manner. It is postulated to be a negative regulator of phyB signalling. 20071603

Basic gene information ( show / hide contents )

Locus AT2G02950 | Chromosome: 2 | Strand: -
Description Encodes a basic soluble protein which can independently bind to either PHYA or PHYB, regardless of whether the phytochromes are in the Pr or Pfr state. PKS1 can be phosphorylated by oat phyA in vitro in a light regulated manner. It is postulated to be a negative regulator of phyB signalling.
Alias
PKS1( alias )
Gene model
AT2G02950.1 | From: 854946 | To: 856537
Sequence
AT2G02950.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
protein binding PMID: 14615593
cellular_component
cytoplasm PMID: 10348744
plasma membrane PMID: 16777956
biological_process
red or far red light signaling pathway PMID: 16891401
red, far-red light phototransduction PMID: 10348744
response to far red light PMID: 17076805
phototropism PMID: 16777956
response to red light PMID: 17076805
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   auxin   ]

Genotype PMID Type
nph3 pks1 pks2 pks4 20071603 mutant
phot1 pks1 pks2 pks4 20071603 mutant
phot2 pks1 pks2 pks4 20071603 mutant
pks1 20071603 mutant
pks1 pks2 pks4 20071603 mutant
35S:PKS1 20071603 transgenic

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT2G02950.1 
length: 1592 
miRNA : ath-miR847
length: 21 
 
mfe: -27.9 kcal/mol 
p-value: 0.013249 
 
position  810 
target 5' C               U    U 
           UAUUGAGAAGAAGAG AGUG  
           GUAGUUCUUCUUCUC UCAC  
miRNA  3'                 C    U 
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_69653
AccessionTaxon
NP_172880Arabidopsis thaliana
NP_565292 ( AT2G02950 )Arabidopsis thaliana
29813.m001476Ricinus communis

No related Cross Link information for this gene.