You are querying gene by "AT2G02740".

Locus: AT2G02740 Alias: ATWHY3

Expression of this gene is regulated by hormone (see microarray data for this gene), but no genetic evidence or Gene Ontology evidence yet supported that this is a hormone-related gene.

Basic gene information ( show / hide contents )

Locus AT2G02740 | Chromosome: 2 | Strand: +
Description Encodes a homolog of the potato p24 protein. It shares the conserved KGKAAL domain, a putative DNA-binding domain, with potato p24 and is localized to the plastid and not the nucleus.
Alias
ATWHY3( alias )
PTAC11( alias )
WHY3( alias )
Gene model
AT2G02740.1 | From: 769343 | To: 771234
AT2G02740.2 | From: 769343 | To: 771247
Sequence
AT2G02740.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT2G02740.2 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
DNA binding PMID:
cellular_component
plastid chromosome PMID: 16326926
chloroplast PMID: 15967440
biological_process
defense response PMID: 15708347
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT2G02740.1 
length: 1094 
miRNA : ath-miR167a
length: 21 
 
mfe: -27.7 kcal/mol 
p-value: 0.007940 
 
position  614 
target 5' C    G  U     C     U 
           AGAU GU CUGGC GCUUC  
           UCUA UA GACCG CGAAG  
miRNA  3' A    G  C     U     U 
 
 
target: AT2G02740.1 
length: 1094 
miRNA : ath-miR167b
length: 21 
 
mfe: -27.7 kcal/mol 
p-value: 0.007505 
 
position  614 
target 5' C    G  U     C     U 
           AGAU GU CUGGC GCUUC  
           UCUA UA GACCG CGAAG  
miRNA  3' A    G  C     U     U 
 
 
target: AT2G02740.1 
length: 1094 
miRNA : ath-miR167d
length: 22 
 
mfe: -32.4 kcal/mol 
p-value: 0.001478 
 
position  612 
target 5' C      G  U     C     U 
           CCAGAU GU CUGGC GCUUC  
           GGUCUA UA GACCG CGAAG  
miRNA  3'        G  C     U     U 
 
 
target: AT2G02740.2 
length: 1104 
miRNA : ath-miR167a
length: 21 
 
mfe: -27.7 kcal/mol 
p-value: 0.008035 
 
position  611 
target 5' C    G  U     C     U 
           AGAU GU CUGGC GCUUC  
           UCUA UA GACCG CGAAG  
miRNA  3' A    G  C     U     U 
 
 
target: AT2G02740.2 
length: 1104 
miRNA : ath-miR167b
length: 21 
 
mfe: -27.7 kcal/mol 
p-value: 0.007583 
 
position  611 
target 5' C    G  U     C     U 
           AGAU GU CUGGC GCUUC  
           UCUA UA GACCG CGAAG  
miRNA  3' A    G  C     U     U 
 
 
target: AT2G02740.2 
length: 1104 
miRNA : ath-miR167d
length: 22 
 
mfe: -32.4 kcal/mol 
p-value: 0.001496 
 
position  609 
target 5' C      G  U     C     U 
           CCAGAU GU CUGGC GCUUC  
           GGUCUA UA GACCG CGAAG  
miRNA  3'        G  C     U     U 
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_40665
AccessionTaxon
NP_001077872Arabidopsis thaliana
NP_172893Arabidopsis thaliana
NP_178377 ( AT2G02740 )Arabidopsis thaliana
186648Chlamydomonas reinhardtii
NP_001056790Oryza sativa Japonica Group
1700010040Ostreococcus tauri
29736.m002027Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
SuperFamilySSF544471.8E-8682267IPR009044ssDNA-binding transcriptional regulator
Gene3DG3DSA:2.30.31.105.500017542664313E-8382248IPR009044ssDNA-binding transcriptional regulator
SuperFamilySSF544471.6E-8582268IPR009044ssDNA-binding transcriptional regulator
PfamPF085361.0999999999999873E-6190228IPR013742Plant transcription factor
PfamPF085366.800000000000058E-6190229IPR013742Plant transcription factor