You are querying gene by "AT1G80840".

Locus: AT1G80840 Alias: ATWRKY40

Hormone Evidence Function category Gene Description PMID
salicylic acidGeneOntology - response to salicylic acid stimulus 12602888

Basic gene information ( show / hide contents )

Locus AT1G80840 | Chromosome: 1 | Strand: +
Description response to salicylic acid stimulus
ATWRKY40( alias )
WRKY40( alias )
Gene model
AT1G80840.1 | From: 30388583 | To: 30390391
AT1G80840.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
transcription factor activity PMID: 16603654
nucleus PMID: 16603654
defense response to fungus PMID: 16603654
response to salicylic acid stimulus PMID: 12602888
regulation of transcription, DNA-dependent PMID:
regulation of defense response PMID: 12068113
defense response to bacterium PMID: 12602888
regulation of defense response to virus by host PMID: 17185563
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

Hormone treatment related datasets  
Abiotic stress treatment related datasets (in root)  
Abiotic stress treatment related datasets (in shoot)  
Development related datasets  

miRNA interaction information for this gene

(Note:target use cDNA sequence)
target: AT1G80840.1 
length: 1195 
miRNA : ath-miR396a
length: 21 
mfe: -25.4 kcal/mol 
p-value: 0.015677 
position  688 
target 5' A       A            G 
miRNA  3' G       C     A        
target: AT1G80840.1 
length: 1195 
miRNA : ath-miR396b
length: 21 
mfe: -25.3 kcal/mol 
p-value: 0.013120 
position  687 
target 5' A        A            G 
miRNA  3'          C     A        

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_51400
NP_178199 ( AT1G80840 )Arabidopsis thaliana
NP_001046094Oryza sativa Japonica Group
NP_001058216Oryza sativa Japonica Group
43951.m000016Ricinus communis
NP_001063184Oryza sativa Japonica Group
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PROSITEPS5081126.773140206IPR003657DNA-binding WRKY
PfamPF031063e-26145204IPR003657DNA-binding WRKY
SMARTSM007742.7e-31145205IPR003657DNA-binding WRKY