You are querying gene by "AT1G80680".

Locus: AT1G80680 Alias: MOS3

Hormone Evidence Function category Gene Description PMID
auxinGeneOntology - response to auxin stimulus 16751346

Basic gene information ( show / hide contents )

Locus AT1G80680 | Chromosome: 1 | Strand: +
Description response to auxin stimulus
Alias
MOS3( alias )
PRE( alias )
SAR3( alias )
Gene model
AT1G80680.1 | From: 30328900 | To: 30333661
Sequence
AT1G80680.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
porin activity PMID: 15772285
cellular_component
nucleus PMID: 15772285
nuclear membrane PMID: 16751346
biological_process
mRNA export from nucleus PMID: 16751346
negative regulation of flower development PMID:
developmental process PMID: 16751346
response to auxin stimulus PMID: 16751346
defense response signaling pathway, resistance gene-dependent PMID: 15772285
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT1G80680.1 
length: 3632 
miRNA : ath-miR417
length: 21 
 
mfe: -22.4 kcal/mol 
p-value: 0.068130 
 
position  2247 
target 5' C                  A  A 
           CG AC AGUUCAUUACCU UC  
           GC UG UUAAGUGAUGGA AG  
miRNA  3' A  U  U                 
 
 
target: AT1G80680.1 
length: 3632 
miRNA : ath-miR867
length: 21 
 
mfe: -23.6 kcal/mol 
p-value: 0.023032 
 
position  2431 
target 5' U       C             U 
           UUCCU G AGACUAUGUUCAG  
           AAGGA U UUUGGUACAAGUU  
miRNA  3'       U A               
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_10798
AccessionTaxon
NP_178183 ( AT1G80680 )Arabidopsis thaliana
NP_001049116Oryza sativa Japonica Group
fgenesh1_pg.C_Chr_01.0001000253Ostreococcus tauri
e_gw1.217.1.1Physcomitrella patens subsp. patens
29588.m000871Ricinus communis
NP_001031018Arabidopsis thaliana
NP_172510Arabidopsis thaliana
NP_176175Arabidopsis thaliana
NP_001066245Oryza sativa Japonica Group
NP_001066246Oryza sativa Japonica Group
fgenesh1_pg.scaffold_217000054Physcomitrella patens subsp. patens
30068.m002624Ricinus communis
fgenesh1_pg.C_Chr_11.0001000069Ostreococcus tauri
DatabaseEntry IDE-valueStartEndInterPro IDDescription
Gene3DG3DSA:3.30.1610.102.1999990098072738E-3942187IPR007230Peptidase S59, nucleoporin
SuperFamilySSF822151.2E-4442194IPR007230Peptidase S59, nucleoporin
PROSITEPS514340.051187IPR007230Peptidase S59, nucleoporin
PfamPF040964.500000000000003E-3353187IPR007230Peptidase S59, nucleoporin
PfamPF121101.2000000000000143E-75576862IPR021967Nuclear protein 96