You are querying gene by "AT1G80080".

Locus: AT1G80080 Alias: AtRLP17

Hormone Evidence Function category Gene Description PMID
abscisic acidGeneOntology - response to abscisic acid stimulus 18434605

Basic gene information ( show / hide contents )

Locus AT1G80080 | Chromosome: 1 | Strand: -
Description response to abscisic acid stimulus
Alias
AtRLP17( alias )
TMM( alias )
Gene model
AT1G80080.1 | From: 30132898 | To: 30134484
Sequence
AT1G80080.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
protein binding PMID:
receptor activity PMID: 12040198
cellular_component
anchored to membrane PMID: 12805588
biological_process
stomatal complex morphogenesis PMID:
asymmetric cell division PMID: 9684356
signal transduction PMID: 11751054
response to abscisic acid stimulus PMID: 18434605
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT1G80080.1 
length: 1587 
miRNA : ath-miR2934
length: 21 
 
mfe: -26.2 kcal/mol 
p-value: 0.006345 
 
position  258 
target 5' U      A       C      G 
           UCC AG CGUUUGC GAGGGA  
           AGG UC GCAAACG CUUUCU  
miRNA  3'     U  C       U        
 
 
target: AT1G80080.1 
length: 1587 
miRNA : ath-miR413
length: 21 
 
mfe: -22.8 kcal/mol 
p-value: 0.079546 
 
position  1221 
target 5' U   G     G        G   A 
           GUG AGGAU AGGAGAAA CUG  
           CAC UCUUG UUCUCUUU GAU  
miRNA  3'     G                  A 
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_69881
AccessionTaxon
NP_178125 ( AT1G80080 )Arabidopsis thaliana
gw1.1.550.1Physcomitrella patens subsp. patens
29841.m002870Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF00560400.0000000000001184204IPR001611Leucine-rich repeat
PfamPF005609.4209225IPR001611Leucine-rich repeat
PfamPF00560519.9999999999998254274IPR001611Leucine-rich repeat
PfamPF00560119.99999999999997279300IPR001611Leucine-rich repeat
PfamPF0056053.00000000000002352372IPR001611Leucine-rich repeat