You are querying gene by "AT1G79530".

Locus: AT1G79530 Alias: GAPCP-1

Expression of this gene is regulated by hormone (see microarray data for this gene), but no genetic evidence or Gene Ontology evidence yet supported that this is a hormone-related gene.

Basic gene information ( show / hide contents )

Locus AT1G79530 | Chromosome: 1 | Strand: -
Description Encodes one of the chloroplast/plastid localized GAPDH isoforms (GAPCp1/At1g79530 and GAPCp2/At1g16300). gapcp double mutants display a drastic phenotype of arrested root development, dwarfism and sterility. GAPCps are important for the synthesis of serine in roots.
GAPCP-1( alias )
Gene model
AT1G79530.1 | From: 29920795 | To: 29924127
AT1G79530.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
glyceraldehyde-3-phosphate dehydrogenase activity PMID:
plastid PMID: 15533878
glycolysis PMID:
KEGG pathway This gene participates in 1 pathways:
Pathway Enzyme
Glycolysis / Gluconeogenesis glyceraldehyde 3-phosphate dehydrogenase
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

Hormone treatment related datasets  
Abiotic stress treatment related datasets (in root)  
Abiotic stress treatment related datasets (in shoot)  
Development related datasets  

miRNA interaction information for this gene

(Note:target use cDNA sequence)
target: AT1G79530.1 
length: 1745 
miRNA : ath-miR773
length: 21 
mfe: -27.6 kcal/mol 
p-value: 0.011726 
position  402 
target 5' A               U   C 
miRNA  3' C               C   U 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_10093
NP_001117276Arabidopsis thaliana
NP_172750Arabidopsis thaliana
NP_174996Arabidopsis thaliana
NP_566796Arabidopsis thaliana
129019Chlamydomonas reinhardtii
NP_001048847Oryza sativa Japonica Group
NP_001052984Oryza sativa Japonica Group
fgenesh1_pg.C_Chr_01.0001000096Ostreococcus tauri
e_gw1.264.13.1Physcomitrella patens subsp. patens
estExt_Genewise1.C_110236Physcomitrella patens subsp. patens
estExt_Genewise1.C_1350020Physcomitrella patens subsp. patens
estExt_fgenesh1_kg.C_2640003Physcomitrella patens subsp. patens
fgenesh1_pg.scaffold_135000009Physcomitrella patens subsp. patens
fgenesh2_pg.scaffold_86000050Physcomitrella patens subsp. patens
30170.m013796Ricinus communis
NP_173080Arabidopsis thaliana
NP_178071 ( AT1G79530 )Arabidopsis thaliana
140618Chlamydomonas reinhardtii
NP_001046031Oryza sativa Japonica Group
NP_001058309Oryza sativa Japonica Group
30147.m013783Ricinus communis
196443Chlamydomonas reinhardtii
estExt_fgenesh1_pm.C_Chr_10.00010071Ostreococcus tauri
estExt_Genewise1.C_3530015Physcomitrella patens subsp. patens
estExt_fgenesh1_kg.C_30006Physcomitrella patens subsp. patens
30169.m006270Ricinus communis
e_gw1.309.12.1Physcomitrella patens subsp. patens
e_gw1.309.13.1Physcomitrella patens subsp. patens
30131.m006931Ricinus communis
NP_172801Arabidopsis thaliana
NP_187062Arabidopsis thaliana
NP_001047348Oryza sativa Japonica Group
NP_001053139Oryza sativa Japonica Group
NP_001060897Oryza sativa Japonica Group
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR108360.087418IPR000173Glyceraldehyde 3-phosphate dehydrogenase subfamily
SMARTSM008461.7999975402237756E-9287236IPR020828Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain
PfamPF000445.000000000000014E-5888236IPR020828Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain
TIGRFAMTIGR015340.088410IPR006424Glyceraldehyde-3-phosphate dehydrogenase, type I
PRINTSPR000784.100013996993149E-48195208IPR020832Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain, subgroup
PRINTSPR000784.100013996993149E-48230248IPR020832Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain, subgroup
PROSITEPS000710.0234241IPR020830Glyceraldehyde 3-phosphate dehydrogenase, active site
PfamPF028006.400000000000042E-70241398IPR020829Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain
PRINTSPR000784.100013996993149E-48257273IPR020832Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain, subgroup
PRINTSPR000784.100013996993149E-48314331IPR020832Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain, subgroup
PRINTSPR000784.100013996993149E-48354369IPR020832Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain, subgroup