You are querying gene by "AT1G79460".

Locus: AT1G79460 Alias: ATKS

Hormone Evidence Function category Gene Description PMID
gibberellinMutant Hormone biosynthesis gibberellin 3-beta-hydroxylase 0012231829
GeneOntology - gibberellic acid mediated signaling 9536043

Basic gene information ( show / hide contents )

Locus AT1G79460 | Chromosome: 1 | Strand: +
Description gibberellin 3-beta-hydroxylase
Alias
ATKS( alias )
GA2( alias )
KS( alias )
Gene model
AT1G79460.1 | From: 29895285 | To: 29899480
Sequence
AT1G79460.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
ent-kaurene synthase activity PMID: 9536043
cellular_component
plastid PMID:
chloroplast PMID: 9536043
chloroplast stroma PMID: 11722763
biological_process
gibberellic acid mediated signaling PMID: 9536043
gibberellin biosynthetic process PMID: 9536043
KEGG pathway This gene participates in 1 pathways:
Pathway Enzyme
Diterpenoid biosynthesis ent-kaurene synthase
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   gibberellin   ]

Genotype PMID Type
ga2-1 9536043 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT1G79460.1 
length: 2576 
miRNA : ath-miR401
length: 21 
 
mfe: -27.2 kcal/mol 
p-value: 0.019226 
 
position  29 
target 5' A    C A              G 
           GUUG U CGACGCC GUUUCG  
           CAGC A GCUGUGG CAAAGC  
miRNA  3' A    C         U        
 
 
target: AT1G79460.1 
length: 2576 
miRNA : ath-miR832-5p
length: 21 
 
mfe: -28.9 kcal/mol 
p-value: 0.021310 
 
position  96 
target 5' G      C            U 
           UUCG U UCCGAUCUCAGC  
           AAGC A GGGCUAGGGUCG  
miRNA  3' A    U A            U 
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_23277
AccessionTaxon
NP_178064 ( AT1G79460 )Arabidopsis thaliana
NP_001047186Oryza sativa Japonica Group
NP_001047190Oryza sativa Japonica Group
NP_001052175Oryza sativa Japonica Group
NP_001053840Oryza sativa Japonica Group
NP_001053841Oryza sativa Japonica Group
NP_001053842Oryza sativa Japonica Group
NP_001066799Oryza sativa Japonica Group
NP_001067887Oryza sativa Japonica Group
28670.m000104Ricinus communis
29806.m000947Ricinus communis
29806.m000952Ricinus communis
29806.m000953Ricinus communis
NP_001047191Oryza sativa Japonica Group
DatabaseEntry IDE-valueStartEndInterPro IDDescription
SuperFamilySSF482398.1E-3651269IPR008930Terpenoid cylases/protein prenyltransferase alpha-alpha toroid
PfamPF013971.700000000000008E-36223413IPR001906Terpene synthase-like
SuperFamilySSF482392.3E-47224438IPR008930Terpenoid cylases/protein prenyltransferase alpha-alpha toroid
Gene3DG3DSA:1.10.600.102.7000136937906497E-101404779IPR008949Terpenoid synthase
SuperFamilySSF485761.0E-108452779IPR008949Terpenoid synthase
PfamPF039365.900000000000078E-69457723IPR005630Terpene synthase, metal-binding domain