You are querying gene by "AT1G79040".

Locus: AT1G79040 Alias: PSBR

Hormone Evidence Function category Gene Description PMID
abscisic acidMutant Plant development SHORT BLUE ROOT 12008902 1546913

Basic gene information ( show / hide contents )

Locus AT1G79040 | Chromosome: 1 | Strand: +
Description SHORT BLUE ROOT
Alias
PSBR( alias )
Gene model
AT1G79040.1 | From: 29740909 | To: 29741902
Sequence
AT1G79040.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
molecular_function_unknown PMID:
cellular_component
chloroplast thylakoid membrane PMID: 15322131
photosystem II PMID:
biological_process
photosystem II oxygen evolving complex assembly PMID: 16282331
photosynthesis PMID:
KEGG pathway This gene participates in 2 pathways:
Pathway Enzyme
Photosynthesis proteins photosystem II 10kDa protein
Photosynthesis photosystem II 10kDa protein
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   abscisic acid   ]

Genotype PMID Type
abi2-1/sbr 12008902 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

No miRNA interaction information for this gene.

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_34030
AccessionTaxon
NP_178025 ( AT1G79040 )Arabidopsis thaliana
98021Chlamydomonas reinhardtii
NP_001061210Oryza sativa Japonica Group
estExt_fgenesh1_kg.C_150013Physcomitrella patens subsp. patens
estExt_fgenesh1_pg.C_410166Physcomitrella patens subsp. patens
estExt_fgenesh1_pg.C_540093Physcomitrella patens subsp. patens
estExt_fgenesh1_pg.C_540094Physcomitrella patens subsp. patens
29650.m000273Ricinus communis
NP_001058886Oryza sativa Japonica Group
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF047251.6e-5042140IPR006814Photosystem II protein PsbR