You are querying gene by "AT1G78300".

Locus: AT1G78300 Alias: 14-3-3OMEGA

Hormone Evidence Function category Gene Description PMID
brassinosteroidGeneOntology - brassinosteroid mediated signaling 17681130

Basic gene information ( show / hide contents )

Locus AT1G78300 | Chromosome: 1 | Strand: +
Description brassinosteroid mediated signaling
Alias
14-3-3OMEGA( alias )
GF14 OMEGA( alias )
GRF2( alias )
Gene model
AT1G78300.1 | From: 29466564 | To: 29468278
Sequence
AT1G78300.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
protein binding PMID:
protein phosphorylated amino acid binding PMID: 10631267
cellular_component
cellular_component_unknown PMID:
biological_process
brassinosteroid mediated signaling PMID: 17681130
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT1G78300.1 
length: 1325 
miRNA : ath-miR780.2
length: 21 
 
mfe: -23.3 kcal/mol 
p-value: 0.025317 
 
position  281 
target 5' G   G                 A 
           AUG UAGA GUUUAUGGAGAA  
           UAC GUCU UAAGUGCUUCUU  
miRNA  3'     G    A              
 
 
target: AT1G78300.1 
length: 1325 
miRNA : ath-miR831
length: 22 
 
mfe: -25.8 kcal/mol 
p-value: 0.011534 
 
position  926 
target 5' G     U  U C      U       A 
           CAGGA GA G UGCGGA GAGAUCA  
           GUUCU CU C AUGCUU CUCUAGU  
miRNA  3'       U                     
 
 
Gene1Gene2Positive/NegativeCategoryEnzyme activityEvidencePMID
AT1G78300AT1G05160negativeotherN/AGO/others17681130
AT1G78300AT2G32440negativeotherN/AGO/others17681130

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_10210
AccessionTaxon
NP_001031982Arabidopsis thaliana
NP_568325Arabidopsis thaliana
NP_568557Arabidopsis thaliana
185967Chlamydomonas reinhardtii
NP_001047234Oryza sativa Japonica Group
NP_001051051Oryza sativa Japonica Group
NP_001053003Oryza sativa Japonica Group
NP_001061856Oryza sativa Japonica Group
gw1.18.00.170.1Ostreococcus tauri
estExt_Genewise1.C_2010026Physcomitrella patens subsp. patens
estExt_Genewise1.C_670097Physcomitrella patens subsp. patens
estExt_fgenesh1_pm.C_3480002Physcomitrella patens subsp. patens
gw1.46.9.1Physcomitrella patens subsp. patens
29908.m006038Ricinus communis
NP_566174Arabidopsis thaliana
28842.m000907Ricinus communis
30174.m009120Ricinus communis
NP_001077649Arabidopsis thaliana
NP_564451Arabidopsis thaliana
NP_001154216Arabidopsis thaliana
NP_564453Arabidopsis thaliana
NP_565176 ( AT1G78300 )Arabidopsis thaliana
NP_567344Arabidopsis thaliana
NP_001031868Arabidopsis thaliana
NP_568229Arabidopsis thaliana
NP_569012Arabidopsis thaliana
NP_851274Arabidopsis thaliana
29908.m006234Ricinus communis
estExt_Genewise1.C_1400036Physcomitrella patens subsp. patens
estExt_fgenesh2_pg.C_1370075Physcomitrella patens subsp. patens
estExt_fgenesh2_pg.C_730052Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_1370068Physcomitrella patens subsp. patens
fgenesh1_pg.scaffold_73000051Physcomitrella patens subsp. patens
NP_564167Arabidopsis thaliana
NP_849698Arabidopsis thaliana
NP_973884Arabidopsis thaliana
NP_564249Arabidopsis thaliana
29908.m006068Ricinus communis
NP_001068067Oryza sativa Japonica Group
187228Chlamydomonas reinhardtii
DatabaseEntry IDE-valueStartEndInterPro IDDescription
SuperFamilySSF484451.3E-1072237IPR00030814-3-3 protein
Gene3DG3DSA:1.20.190.201.5999883531362235E-1073251IPR00030814-3-3 protein
PIRPIRSF0008680.03247IPR00030814-3-3 protein
PANTHERPTHR188600.03255IPR00030814-3-3 protein
PfamPF002441.0E-1125241IPR00030814-3-3 protein
SMARTSM001010.05248IPR00030814-3-3 protein
PRINTSPR003052.2999842048856965E-883968IPR00030814-3-3 protein
PROSITEPS007960.04555IPR00030814-3-3 protein
PRINTSPR003052.2999842048856965E-8888112IPR00030814-3-3 protein
PRINTSPR003052.2999842048856965E-88119141IPR00030814-3-3 protein
PRINTSPR003052.2999842048856965E-88154180IPR00030814-3-3 protein
PRINTSPR003052.2999842048856965E-88181207IPR00030814-3-3 protein
PRINTSPR003052.2999842048856965E-88208237IPR00030814-3-3 protein
PROSITEPS007970.0217236IPR00030814-3-3 protein