You are querying gene by "AT1G78080".

Locus: AT1G78080 Alias: RAP2.4

Expression of this gene is regulated by hormone (see microarray data for this gene), but no genetic evidence or Gene Ontology evidence yet supported that this is a hormone-related gene.

Basic gene information ( show / hide contents )

Locus AT1G78080 | Chromosome: 1 | Strand: +
Description encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family (RAP2.4). The protein contains one AP2 domain. There are 8 members in this subfamily.
Alias
RAP2.4( alias )
Gene model
AT1G78080.1 | From: 29369142 | To: 29370966
Sequence
AT1G78080.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
DNA binding PMID: 9192694
transcription factor activity PMID: 11118137
cellular_component
nucleus PMID: 9192694
biological_process
regulation of transcription, DNA-dependent PMID:
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

No miRNA interaction information for this gene.

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_37312
AccessionTaxon
NP_177931 ( AT1G78080 )Arabidopsis thaliana
NP_001048142Oryza sativa Japonica Group
28206.m000104Ricinus communis
29908.m006005Ricinus communis
NP_179810Arabidopsis thaliana
NP_195688Arabidopsis thaliana
e_gw1.187.17.1Physcomitrella patens subsp. patens
e_gw1.335.26.1Physcomitrella patens subsp. patens
DatabaseEntry IDE-valueStartEndInterPro IDDescription
Gene3DG3DSA:3.30.730.101.2000011745813984E-23150211IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
SuperFamilySSF541718.2E-25150211IPR016177DNA-binding, integrase-type
SMARTSM003806.10002656149838E-38151214IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
PROSITEPS510320.0151208IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
PRINTSPR003673.0999994589937024E-11152163IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
PfamPF008477.299999999999985E-15152200IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
PRINTSPR003673.0999994589937024E-11174190IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding