You are querying gene by "AT1G73590".

Locus: AT1G73590 Alias: ATPIN1

Hormone Evidence Function category Gene Description PMID
auxinMutant Hormone transportion 12324609 15371311 15635403
GeneOntology - auxin polar transport 16601150

Basic gene information ( show / hide contents )

Locus AT1G73590 | Chromosome: 1 | Strand: +
Description
Alias
ATPIN1( alias )
PIN1( alias )
Gene model
AT1G73590.1 | From: 27663334 | To: 27666839
Sequence
AT1G73590.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
transporter activity PMID:
cellular_component
membrane PMID: 11152613
apical part of cell PMID: 16107478
cytoplasm PMID: 15610358
basal plasma membrane PMID: 0011959844
biological_process
xylem and phloem pattern formation PMID: 16943276
leaf formation PMID: 16971475
root development PMID: 9856939
photomorphogenesis PMID: 16141452
gravitropism PMID: 16601150
auxin polar transport PMID: 16601150
leaf shaping PMID: 16971475
shoot development PMID: 11060241
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   auxin   ]

Genotype PMID Type
pin1 12324609 mutant
pin1 pid 15371311 mutant
pin1pin3pin4pin7 15635403 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT1G73590.1 
length: 2270 
miRNA : ath-miR838
length: 21 
 
mfe: -22.8 kcal/mol 
p-value: 0.053978 
 
position  1241 
target 5' A    U C  C            A 
           UGUG U GG GGUGGAGGAGGA  
           ACAC G UC UCAUCUUCUUUU  
miRNA  3'        U  U              
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_19973
AccessionTaxon
NP_001077584Arabidopsis thaliana
NP_177250Arabidopsis thaliana
NP_177500 ( AT1G73590 )Arabidopsis thaliana
NP_564189Arabidopsis thaliana
NP_565261Arabidopsis thaliana
NP_568848Arabidopsis thaliana
NP_849700Arabidopsis thaliana
NP_849923Arabidopsis thaliana
NP_001043692Oryza sativa Japonica Group
NP_001048095Oryza sativa Japonica Group
NP_001057227Oryza sativa Japonica Group
NP_001058268Oryza sativa Japonica Group
NP_001065693Oryza sativa Japonica Group
e_gw1.18.1.1Physcomitrella patens subsp. patens
estExt_Genewise1.C_100014Physcomitrella patens subsp. patens
fgenesh1_pg.scaffold_32000025Physcomitrella patens subsp. patens
29662.m000472Ricinus communis
29816.m000677Ricinus communis
30180.m001064Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
TIGRFAMTIGR009460.01622IPR014024Auxin efflux carrier, subgroup
PfamPF035470.09617IPR004776Auxin efflux carrier