You are querying gene by "AT1G72520".

Locus: AT1G72520 Alias: AT1G72520

Hormone Evidence Function category Gene Description PMID
jasmonic acidGeneOntology - jasmonic acid biosynthetic process 8702864

Basic gene information ( show / hide contents )

Locus AT1G72520 | Chromosome: 1 | Strand: +
Description jasmonic acid biosynthetic process
Alias
AT1G72520( alias )
Gene model
AT1G72520.1 | From: 27312179 | To: 27316416
Sequence
AT1G72520.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen PMID:
metal ion binding PMID:
iron ion binding PMID:
lipoxygenase activity PMID:
cellular_component
chloroplast PMID:
biological_process
response to wounding PMID: 9232884
defense response PMID: 9232884
jasmonic acid biosynthetic process PMID: 8702864
growth PMID: 9232884
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT1G72520.1 
length: 3042 
miRNA : ath-miR869.2
length: 21 
 
mfe: -25.1 kcal/mol 
p-value: 0.067736 
 
position  1449 
target 5' G      A           U  A 
           GUCAGC AUCUUGAC CC GA  
           CAGUUG UAGAGUUG GG CU  
miRNA  3'        A        U  U    
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_11048
AccessionTaxon
29468.m000030Ricinus communis
29726.m003891Ricinus communis
29808.m000898Ricinus communis
29851.m002422Ricinus communis
29851.m002424Ricinus communis
29929.m004699Ricinus communis
30128.m008781Ricinus communis
NP_176923Arabidopsis thaliana
NP_177396 ( AT1G72520 )Arabidopsis thaliana
NP_188879Arabidopsis thaliana
NP_564021Arabidopsis thaliana
NP_566875Arabidopsis thaliana
144677Chlamydomonas reinhardtii
NP_001049158Oryza sativa Japonica Group
NP_001050993Oryza sativa Japonica Group
NP_001050995Oryza sativa Japonica Group
NP_001052913Oryza sativa Japonica Group
NP_001055143Oryza sativa Japonica Group
NP_001062199Oryza sativa Japonica Group
NP_001062200Oryza sativa Japonica Group
NP_001068135Oryza sativa Japonica Group
e_gw1.171.1.1Physcomitrella patens subsp. patens
e_gw1.21.1.1Physcomitrella patens subsp. patens
e_gw1.434.22.1Physcomitrella patens subsp. patens
e_gw1.97.30.1Physcomitrella patens subsp. patens
estExt_Genewise1.C_4190013Physcomitrella patens subsp. patens
estExt_fgenesh1_pg.C_4190004Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_2320058Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_4190009Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_4190017Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_700115Physcomitrella patens subsp. patens
29680.m001710Ricinus communis
30152.m002449Ricinus communis
30169.m006387Ricinus communis
30169.m006389Ricinus communis
30178.m000859Ricinus communis
NP_175900Arabidopsis thaliana
NP_001046180Oryza sativa Japonica Group
NP_001050990Oryza sativa Japonica Group
NP_001051212Oryza sativa Japonica Group
NP_001067011Oryza sativa Japonica Group
NP_001067015Oryza sativa Japonica Group
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR117710.067926IPR000907Lipoxygenase
Gene3DG3DSA:2.60.60.201.9000069431526996E-5385250IPR001024Lipoxygenase, LH2
SuperFamilySSF497233.5E-4889232IPR008976Lipase/lipooxygenase, PLAT/LH2
SMARTSM003083.9999854413940614E-5090229IPR001024Lipoxygenase, LH2
PROSITEPS500950.0106228IPR001024Lipoxygenase, LH2
PfamPF014777.300000000000018E-14127225IPR001024Lipoxygenase, LH2
PRINTSPR004688.500030248090602E-64198216IPR001246Lipoxygenase, plant
PRINTSPR004688.500030248090602E-64224245IPR001246Lipoxygenase, plant
PROSITEPS513930.0231926IPR013819Lipoxygenase, C-terminal
SuperFamilySSF484840.0233926IPR013819Lipoxygenase, C-terminal
PfamPF003050.0239910IPR013819Lipoxygenase, C-terminal
PRINTSPR004688.500030248090602E-64263279IPR001246Lipoxygenase, plant
PRINTSPR004688.500030248090602E-64295314IPR001246Lipoxygenase, plant
PRINTSPR004688.500030248090602E-64361382IPR001246Lipoxygenase, plant
PRINTSPR004688.500030248090602E-64409425IPR001246Lipoxygenase, plant
PRINTSPR004688.500030248090602E-64448467IPR001246Lipoxygenase, plant
PRINTSPR004688.500030248090602E-64516540IPR001246Lipoxygenase, plant
PRINTSPR000871.0E-19562579IPR013819Lipoxygenase, C-terminal
PRINTSPR000871.0E-19580597IPR013819Lipoxygenase, C-terminal
PROSITEPS007110.0580594IPR020833Lipoxygenase, iron binding site
PRINTSPR000871.0E-19600620IPR013819Lipoxygenase, C-terminal
PROSITEPS000810.0607617IPR020834Lipoxygenase, conserved site
PRINTSPR004688.500030248090602E-64838852IPR001246Lipoxygenase, plant