You are querying gene by "AT1G72360".

Locus: AT1G72360 Alias: HRE1

Hormone Evidence Function category Gene Description PMID
ethyleneGeneOntology - ethylene mediated signaling pathway 9687012

Basic gene information ( show / hide contents )

Locus AT1G72360 | Chromosome: 1 | Strand: +
Description ethylene mediated signaling pathway
Alias
HRE1( alias )
Gene model
AT1G72360.1 | From: 27245474 | To: 27246489
AT1G72360.2 | From: 27245474 | To: 27246489
Sequence
AT1G72360.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT1G72360.2 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
DNA binding PMID:
transcription factor activity PMID: 9687012
cellular_component
nucleus PMID:
biological_process
ethylene mediated signaling pathway PMID: 9687012
regulation of transcription, DNA-dependent PMID:
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT1G72360.1 
length: 1016 
miRNA : ath-miR837-5p
length: 21 
 
mfe: -26.6 kcal/mol 
p-value: 0.006127 
 
position  765 
target 5' C  U             A   A 
           GA GCGAAUAAGAAAC UGA  
           CU UGCUUGUUCUUUG ACU  
miRNA  3' A  U                 A 
 
 
target: AT1G72360.1 
length: 1016 
miRNA : ath-miR838
length: 21 
 
mfe: -30.4 kcal/mol 
p-value: 0.000593 
 
position  611 
target 5' C       C             U 
           UGUGCAA AGGUAGAGGAGAA  
           ACACGUU UUCAUCUUCUUUU  
miRNA  3'         C               
 
 
target: AT1G72360.2 
length: 931 
miRNA : ath-miR837-5p
length: 21 
 
mfe: -26.6 kcal/mol 
p-value: 0.005493 
 
position  680 
target 5' C  U             A   A 
           GA GCGAAUAAGAAAC UGA  
           CU UGCUUGUUCUUUG ACU  
miRNA  3' A  U                 A 
 
 
target: AT1G72360.2 
length: 931 
miRNA : ath-miR838
length: 21 
 
mfe: -30.4 kcal/mol 
p-value: 0.000520 
 
position  526 
target 5' C       C             U 
           UGUGCAA AGGUAGAGGAGAA  
           ACACGUU UUCAUCUUCUUUU  
miRNA  3'         C               
 
 
target: AT1G72360.3 
length: 930 
miRNA : ath-miR837-5p
length: 21 
 
mfe: -26.6 kcal/mol 
p-value: 0.005486 
 
position  679 
target 5' C  U             A   A 
           GA GCGAAUAAGAAAC UGA  
           CU UGCUUGUUCUUUG ACU  
miRNA  3' A  U                 A 
 
 
target: AT1G72360.3 
length: 930 
miRNA : ath-miR838
length: 21 
 
mfe: -30.4 kcal/mol 
p-value: 0.000519 
 
position  525 
target 5' C       C             U 
           UGUGCAA AGGUAGAGGAGAA  
           ACACGUU UUCAUCUUCUUUU  
miRNA  3'         C               
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_69458
AccessionTaxon
NP_001077812Arabidopsis thaliana
NP_001117587Arabidopsis thaliana
NP_177380 ( AT1G72360 )Arabidopsis thaliana
DatabaseEntry IDE-valueStartEndInterPro IDDescription
Gene3DG3DSA:3.30.730.103.6e-232384IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
PfamPF008473.1e-172373IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
SuperFamilySSF541712.3e-242384IPR016177DNA-binding, integrase-type
SMARTSM003806.6e-372487IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
PROSITEPS5103224.1442481IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
PRINTSPR003673.8e-112536IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
PRINTSPR003673.8e-114763IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
Gene3DG3DSA:3.30.730.103.8000069709354466E-2372133IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
PfamPF008473.500000000000003E-1472122IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
SuperFamilySSF541712.3000044072653925E-2472133IPR016177DNA-binding, integrase-type
SMARTSM003803.999985441394061E-3773136IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
PROSITEPS510320.073130IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
Gene3DG3DSA:3.30.730.103.6e-2374135IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
PfamPF008474.4e-1774124IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
SuperFamilySSF541712.3e-2474135IPR016177DNA-binding, integrase-type
PRINTSPR003675.200000890033361E-117485IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
SMARTSM003806.6e-3775138IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
PROSITEPS5103224.14475132IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
PRINTSPR003675.3e-117687IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
PRINTSPR003675.200000890033361E-1196112IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
PRINTSPR003675.3e-1198114IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding