You are querying gene by "AT1G71860".

Locus: AT1G71860 Alias: ATPTP1

Hormone Evidence Function category Gene Description PMID
salicylic acidMutant Hormone signal transduction Encodes a protein with tyrosine phosphatase activity that is downregulated in response to cold and upregulated in response to salt stress. 19789277

Basic gene information ( show / hide contents )

Locus AT1G71860 | Chromosome: 1 | Strand: +
Description Encodes a protein with tyrosine phosphatase activity that is downregulated in response to cold and upregulated in response to salt stress.
Alias
ATPTP1( alias )
PTP1( alias )
Gene model
AT1G71860.2 | From: 27030391 | To: 27032735
AT1G71860.1 | From: 27030373 | To: 27032754
AT1G71860.3 | From: 27030373 | To: 27032754
Sequence
AT1G71860.2 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT1G71860.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT1G71860.3 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
protein tyrosine phosphatase activity PMID: 9596642
cellular_component
nucleus PMID: 15610358
cytoplasm PMID: 15610358
biological_process
protein kinase cascade PMID: 9596642
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   salicylic acid   ]

Genotype PMID Type
mkp1 ptp1 19789277 mutant
mkp1 ptp1 19789277 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT1G71860.1 
length: 1510 
miRNA : ath-miR773
length: 21 
 
mfe: -27.6 kcal/mol 
p-value: 0.009882 
 
position  1151 
target 5' G        U            U 
           GGGACAAA GCUGGAA CGAG  
           CUCUGUUU CGACCUU GUUU  
miRNA  3'          U       C      
 
 
target: AT1G71860.2 
length: 1468 
miRNA : ath-miR773
length: 21 
 
mfe: -27.6 kcal/mol 
p-value: 0.009552 
 
position  1128 
target 5' G        U            U 
           GGGACAAA GCUGGAA CGAG  
           CUCUGUUU CGACCUU GUUU  
miRNA  3'          U       C      
 
 
target: AT1G71860.3 
length: 1504 
miRNA : ath-miR773
length: 21 
 
mfe: -27.6 kcal/mol 
p-value: 0.009835 
 
position  1151 
target 5' G        U            U 
           GGGACAAA GCUGGAA CGAG  
           CUCUGUUU CGACCUU GUUU  
miRNA  3'          U       C      
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_13615
AccessionTaxon
NP_001031266 ( AT1G71860 )Arabidopsis thaliana
NP_177331Arabidopsis thaliana
NP_974127Arabidopsis thaliana
120069Chlamydomonas reinhardtii
DatabaseEntry IDE-valueStartEndInterPro IDDescription
SMARTSM001941.7999975402237506E-4557268IPR000242Protein-tyrosine phosphatase, receptor/non-receptor type
SMARTSM001943.799973593093985E-10157328IPR000242Protein-tyrosine phosphatase, receptor/non-receptor type
PROSITEPS500550.058265IPR000242Protein-tyrosine phosphatase, receptor/non-receptor type
PROSITEPS500550.058326IPR000242Protein-tyrosine phosphatase, receptor/non-receptor type
PfamPF001027.100000000000077E-4887266IPR000242Protein-tyrosine phosphatase, receptor/non-receptor type
PfamPF001025.599999999999994E-7187324IPR000242Protein-tyrosine phosphatase, receptor/non-receptor type
PRINTSPR007003.899998617952183E-13116123IPR000242Protein-tyrosine phosphatase, receptor/non-receptor type
PRINTSPR007001.6000024069599735E-34116123IPR000242Protein-tyrosine phosphatase, receptor/non-receptor type
PRINTSPR007003.899998617952183E-13134154IPR000242Protein-tyrosine phosphatase, receptor/non-receptor type
PRINTSPR007001.6000024069599735E-34134154IPR000242Protein-tyrosine phosphatase, receptor/non-receptor type
PRINTSPR007003.899998617952183E-13222239IPR000242Protein-tyrosine phosphatase, receptor/non-receptor type
PRINTSPR007001.6000024069599735E-34222239IPR000242Protein-tyrosine phosphatase, receptor/non-receptor type
PROSITEPS500560.0245317IPR000387Dual-specific/protein-tyrosine phosphatase, conserved region
PRINTSPR007001.6000024069599735E-34260278IPR000242Protein-tyrosine phosphatase, receptor/non-receptor type
PROSITEPS003830.0263273IPR016130Protein-tyrosine phosphatase, active site
PRINTSPR007001.6000024069599735E-34293308IPR000242Protein-tyrosine phosphatase, receptor/non-receptor type
PRINTSPR007001.6000024069599735E-34309319IPR000242Protein-tyrosine phosphatase, receptor/non-receptor type