You are querying gene by "AT1G70560".

Locus: AT1G70560 Alias: wei8

Hormone Evidence Function category Gene Description PMID
auxinMutant Hormone biosynthesis 18394997 18394996 17630275 17630276

Basic gene information ( show / hide contents )

Locus AT1G70560 | Chromosome: 1 | Strand: +
Description
Alias
wei8( alias )
Gene model
AT1G70560.1 | From: 26608518 | To: 26611166
Sequence
AT1G70560.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
carbon-sulfur lyase activity PMID:
cellular_component
cellular_component_unknown PMID:
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   auxin   ]

Genotype PMID Type
wei8 18394997 18394996 17630275 17630276 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT1G70560.1 
length: 1399 
miRNA : ath-miR783
length: 21 
 
mfe: -24.8 kcal/mol 
p-value: 0.023078 
 
position  1074 
target 5' C  G                G 
           AA GU AAUGAGCAGAGCU  
           UU UA UUGCUCGUUUCGA  
miRNA  3' C  G  C             A 
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_69694
AccessionTaxon
NP_173746Arabidopsis thaliana
NP_177213 ( AT1G70560 )Arabidopsis thaliana
27504.m000622Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
SuperFamilySSF533831.5E-7419383IPR015424Pyridoxal phosphate-dependent transferase, major domain
PfamPF048640.025383IPR006948Allinase, C-terminal
Gene3DG3DSA:3.40.640.101.7999975402237754E-8669276IPR015421Pyridoxal phosphate-dependent transferase, major region, subdomain 1
Gene3DG3DSA:3.90.1150.108.79996401030984E-37276385IPR015422Pyridoxal phosphate-dependent transferase, major region, subdomain 2