You are querying gene by "AT1G69960".

Locus: AT1G69960 Alias: PP2A

Hormone Evidence Function category Gene Description PMID
auxinGeneOntology - auxin polar transport 8641277

Basic gene information ( show / hide contents )

Locus AT1G69960 | Chromosome: 1 | Strand: -
Description auxin polar transport
Alias
PP2A( alias )
Gene model
AT1G69960.1 | From: 26352384 | To: 26354360
Sequence
AT1G69960.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
protein serine/threonine phosphatase activity PMID: 8382968
cellular_component
cellular_component_unknown PMID:
biological_process
auxin polar transport PMID: 8641277
KEGG pathway This gene participates in 4 pathways:
Pathway Enzyme
Wnt signaling pathway protein phosphatase 2 (formerly 2A), catalytic subunit
TGF-beta signaling pathway protein phosphatase 2 (formerly 2A), catalytic subunit
Tight junction protein phosphatase 2 (formerly 2A), catalytic subunit
Long-term depression protein phosphatase 2 (formerly 2A), catalytic subunit
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT1G69960.1 
length: 1281 
miRNA : ath-miR414
length: 21 
 
mfe: -26.3 kcal/mol 
p-value: 0.003304 
 
position  88 
target 5' G  G            U    A  U 
           GA UGAUGAUGAUGA AGAU GA  
           CU GCUACUACUACU UCUA CU  
miRNA  3' A                         
 
 
Gene1Gene2Positive/NegativeCategoryEnzyme activityEvidencePMID
AT1G69960AT4G33950negativemodification PN/AGO/others8641277

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_10586
AccessionTaxon
NP_172514Arabidopsis thaliana
NP_176192Arabidopsis thaliana
NP_177154 ( AT1G69960 )Arabidopsis thaliana
193562Chlamydomonas reinhardtii
NP_001046300Oryza sativa Japonica Group
NP_001057926Oryza sativa Japonica Group
e_gw1.07.00.288.1Ostreococcus tauri
estExt_Genewise1.C_3570039Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_1020103Physcomitrella patens subsp. patens
30147.m014035Ricinus communis
NP_001051627Oryza sativa Japonica Group
NP_001049084Oryza sativa Japonica Group
NP_001064578Oryza sativa Japonica Group
NP_565974Arabidopsis thaliana
NP_567066Arabidopsis thaliana
estExt_fgenesh1_kg.C_810008Physcomitrella patens subsp. patens
estExt_fgenesh1_pg.C_880102Physcomitrella patens subsp. patens
27574.m000219Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR116680.010307IPR006186Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase
SMARTSM001560.021291IPR006186Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase
PRINTSPR001147.800051553995069E-914976IPR006186Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase
PfamPF001491.7000000000000082E-3849241IPR004843Metallophosphoesterase
PRINTSPR001147.800051553995069E-9178105IPR006186Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase
PRINTSPR001147.800051553995069E-91111135IPR006186Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase
PROSITEPS001250.0112117IPR006186Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase
PRINTSPR001147.800051553995069E-91146172IPR006186Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase
PRINTSPR001147.800051553995069E-91175202IPR006186Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase
PRINTSPR001147.800051553995069E-91231251IPR006186Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase
PRINTSPR001147.800051553995069E-91253269IPR006186Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase