You are querying gene by "AT1G67080".

Locus: AT1G67080 Alias: ABA4

Hormone Evidence Function category Gene Description PMID
abscisic acidMutant Hormone biosynthesis Encodes a novel chloroplast protein 17470058
GeneOntology - abscisic acid biosynthetic process 17470058

Basic gene information ( show / hide contents )

Locus AT1G67080 | Chromosome: 1 | Strand: -
Description Encodes a novel chloroplast protein
Alias
ABA4( alias )
Gene model
AT1G67080.1 | From: 25048888 | To: 25050523
Sequence
AT1G67080.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
intramolecular oxidoreductase activity PMID: 17470058
cellular_component
PSII associated light-harvesting complex II PMID: 17351115
chloroplast envelope PMID: 12766230
biological_process
regulation of superoxide release PMID: 17351115
xanthophyll metabolic process PMID: 17470058
photoprotection PMID: 17351115
abscisic acid biosynthetic process PMID: 17470058
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   abscisic acid   ]

Genotype PMID Type
aba4-1 17470058 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT1G67080.1 
length: 1022 
miRNA : ath-miR156a
length: 20 
 
mfe: -26.5 kcal/mol 
p-value: 0.010998 
 
position  767 
target 5' U                  C 
           UGC C UUCUCUUCUGUC  
           ACG G GAGAGAAGACAG  
miRNA  3' C   A U            U 
 
 
target: AT1G67080.1 
length: 1022 
miRNA : ath-miR156b
length: 20 
 
mfe: -26.5 kcal/mol 
p-value: 0.008128 
 
position  767 
target 5' U                  C 
           UGC C UUCUCUUCUGUC  
           ACG G GAGAGAAGACAG  
miRNA  3' C   A U            U 
 
 
target: AT1G67080.1 
length: 1022 
miRNA : ath-miR156c
length: 20 
 
mfe: -26.5 kcal/mol 
p-value: 0.007439 
 
position  767 
target 5' U                  C 
           UGC C UUCUCUUCUGUC  
           ACG G GAGAGAAGACAG  
miRNA  3' C   A U            U 
 
 
target: AT1G67080.1 
length: 1022 
miRNA : ath-miR156d
length: 20 
 
mfe: -26.5 kcal/mol 
p-value: 0.009229 
 
position  767 
target 5' U                  C 
           UGC C UUCUCUUCUGUC  
           ACG G GAGAGAAGACAG  
miRNA  3' C   A U            U 
 
 
target: AT1G67080.1 
length: 1022 
miRNA : ath-miR156e
length: 20 
 
mfe: -26.5 kcal/mol 
p-value: 0.009538 
 
position  767 
target 5' U                  C 
           UGC C UUCUCUUCUGUC  
           ACG G GAGAGAAGACAG  
miRNA  3' C   A U            U 
 
 
target: AT1G67080.1 
length: 1022 
miRNA : ath-miR156f
length: 20 
 
mfe: -26.5 kcal/mol 
p-value: 0.008888 
 
position  767 
target 5' U                  C 
           UGC C UUCUCUUCUGUC  
           ACG G GAGAGAAGACAG  
miRNA  3' C   A U            U 
 
 
target: AT1G67080.1 
length: 1022 
miRNA : ath-miR156g
length: 20 
 
mfe: -26.8 kcal/mol 
p-value: 0.007093 
 
position  767 
target 5' U                  C 
           UGC C UUCUCUUCUGUC  
           ACG G GAGAGAAGACAG  
miRNA  3' C   A U            C 
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_34146
AccessionTaxon
NP_564889 ( AT1G67080 )Arabidopsis thaliana
183917Chlamydomonas reinhardtii
187252Chlamydomonas reinhardtii
0300010555Ostreococcus tauri
e_gw1.108.40.1Physcomitrella patens subsp. patens
e_gw1.96.82.1Physcomitrella patens subsp. patens
30167.m000879Ricinus communis
NP_001041911Oryza sativa Japonica Group

No related Cross Link information for this gene.