You are querying gene by "AT1G64280".

Locus: AT1G64280 Alias: NIM1

Hormone Evidence Function category Gene Description PMID
salicylic acidMutant Hormone signal transduction encodes a novel protein containing ankyrin repeats 9019406 8725243 12244227 11607555 909085

Basic gene information ( show / hide contents )

Locus AT1G64280 | Chromosome: 1 | Strand: -
Description encodes a novel protein containing ankyrin repeats
Alias
NIM1( alias )
NPR1( alias )
SAI1( alias )
Gene model
AT1G64280.1 | From: 23856411 | To: 23859229
Sequence
AT1G64280.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
protein binding PMID:
transcription activator activity PMID: 17172357
cellular_component
nucleus PMID: 10662863
cytoplasm PMID: 10662863
biological_process
response to wounding PMID: 11891259
defense response to fungus PMID: 17513501
systemic acquired resistance, salicylic acid mediated signaling pathway PMID: 9019406
cell death PMID: 10978297
systemic acquired resistance PMID: 17419843
response to heat PMID: 15923322
response to bacterium PMID: 15842626
response to insect PMID: 15923339
negative regulation of defense response PMID: 16732289
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   salicylic acid   ]

Genotype PMID Type
npr1-2 8725243 mutant
npr1-3 8725243 mutant
npr1-4 9019406 mutant
npr1-1 12244227 9019406 mutant
sai1(npr1-5) 9002272 9019406 mutant
nim1-1 11607555 mutant
nim1-2 9090885 mutant
nim1-3 9090885 mutant
nim1-4 9090885 mutant
nim1-6 9090885 mutant
acd6-1 npr1-1 19144005 mutant
acd6-1 npr1-1 pad4-1 19144005 mutant
rfc3-1 npr1-1 19482917 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT1G64280.1 
length: 2522 
miRNA : ath-miR780.1
length: 21 
 
mfe: -28.0 kcal/mol 
p-value: 0.028990 
 
position  1685 
target 5' C  G                C  C 
           GC CUGUUCGGCAGU GCU GA  
           UG GACGAGUUGUCG CGA CU  
miRNA  3'                 A   U    
 
 
target: AT1G64280.1 
length: 2522 
miRNA : ath-miR843
length: 21 
 
mfe: -28.5 kcal/mol 
p-value: 0.010349 
 
position  484 
target 5' G              G      G 
           CC GUGAAGCUCGA CUUAAG  
           GG UACUUCGAGCU GGAUUU  
miRNA  3' A  U                    
 
 
Gene1Gene2Positive/NegativeCategoryEnzyme activityEvidencePMID
AT1G64280(-)-JAnegativeotherN/Amolecular16623907
AT1G64280AT1G07745PositiveotherN/Amutance10458608
AT1G64280AT1G14410PositiveotherN/AGO/othersN/A
AT1G64280AT1G22070PositivetransciptN/Amutance9019406
AT1G64280AT1G54040negativeotherN/AGO/others17369373
AT1G64280AT2G14610negativeotherN/Amutance9019406
AT1G64280AT2G39940negativeotherN/Amolecular19176718
AT1G64280AT2G40750PositivetransciptN/Amutance17096590
AT1G64280AT3G01080PositivetransciptN/Amutance17096590
AT1G64280AT3G12250PositivetransciptN/Amutance9019406
AT1G64280AT3G56400PositivetransciptN/Amutance17096590
AT1G64280AT3G57260negativeotherN/Amutance9019406
AT1G64280AT4G18470negativeotherN/Amutance10458608
AT1G64280AT4G23810PositivetransciptN/Amutance17096590
AT1G64280AT4G31800PositivetransciptN/Amutance17096590
AT1G64280AT5G06950PositivetransciptN/Amutance9019406
AT1G64280AT5G06960PositivetransciptN/Amutance9019406
AT1G64280AT5G10030PositivetransciptN/Amutance9019406
AT1G64280AT5G33340PositiveotherN/AGO/othersN/A
AT1G64280AT5G44420negativeotherN/Amutance9019406
AT1G64280AT5G65210PositivetransciptN/Amutance9019406
AT1G64280DTH9 PositiveotherN/Amutance11090213

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_58504
AccessionTaxon
NP_176610 ( AT1G64280 )Arabidopsis thaliana
NP_194342Arabidopsis thaliana
NP_001042286Oryza sativa Japonica Group
29912.m005368Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
SuperFamilySSF546954.6e-1135194IPR011333BTB/POZ fold
Gene3DG3DSA:3.30.710.100.0004261190IPR011333BTB/POZ fold
PfamPF006514.9e-0963190IPR013069BTB/POZ
SMARTSM002252.3e-1565194IPR000210BTB/POZ-like
PROSITEPS5009715.61865144IPR000210BTB/POZ-like
SuperFamilySSF484035.5e-21234369IPR020683Ankyrin repeat-containing domain
Gene3DG3DSA:1.25.40.208.2e-15264369IPR020683Ankyrin repeat-containing domain
SMARTSM002482.1e+02265295IPR002110Ankyrin repeat
PROSITEPS5029717.741294369IPR020683Ankyrin repeat-containing domain
SMARTSM002481.9328357IPR002110Ankyrin repeat
PROSITEPS500889.805328360IPR002110Ankyrin repeat
PfamPF123131.1e-81369575IPR021094NPR1/NIM1 like, C-terminal