You are querying gene by "AT1G64060".

Locus: AT1G64060 Alias: ATRBOH F

Hormone Evidence Function category Gene Description PMID
ethyleneGeneOntology - ethylene mediated signaling pathway 10381874
abscisic acidGeneOntology - abscisic acid mediated signaling 12773379

Basic gene information ( show / hide contents )

Locus AT1G64060 | Chromosome: 1 | Strand: +
Description abscisic acid mediated signaling
Alias
ATRBOH F( alias )
ATRBOHF( alias )
RBOHAP108( alias )
RBOHF( alias )
Gene model
AT1G64060.1 | From: 23773437 | To: 23780594
Sequence
AT1G64060.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
NAD(P)H oxidase activity PMID: 12773379
cellular_component
integral to plasma membrane PMID: 9490748
biological_process
ethylene mediated signaling pathway PMID: 10381874
abscisic acid mediated signaling PMID: 12773379
negative regulation of programmed cell death PMID: 11756663
response to ethylene stimulus PMID: 16961732
oxygen and reactive oxygen species metabolic process PMID: 11756663
defense response PMID: 11756663
regulation of stomatal movement PMID: 16961732
hydrogen peroxide biosynthetic process PMID: 16961732
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT1G64060.1 
length: 3941 
miRNA : ath-miR778
length: 21 
 
mfe: -26.8 kcal/mol 
p-value: 0.023942 
 
position  2973 
target 5' A             G     G 
           GGUGU CAUGAAC AAGUU  
           CCACA GUAUUUG UUCGG  
miRNA  3' G     U       G     U 
 
 
target: AT1G64060.1 
length: 3941 
miRNA : ath-miR867
length: 21 
 
mfe: -23.7 kcal/mol 
p-value: 0.023706 
 
position  1665 
target 5' A    U          A   U 
           UCCU AUGGAUCAUG UCA  
           AGGA UAUUUGGUAC AGU  
miRNA  3' A    U          A   U 
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_10830
AccessionTaxon
NP_172383Arabidopsis thaliana
NP_173357Arabidopsis thaliana
NP_190167Arabidopsis thaliana
NP_192862Arabidopsis thaliana
NP_194239Arabidopsis thaliana
NP_196356Arabidopsis thaliana
NP_199602Arabidopsis thaliana
NP_199919Arabidopsis thaliana
NP_200809Arabidopsis thaliana
NP_564821 ( AT1G64060 )Arabidopsis thaliana
NP_973799Arabidopsis thaliana
NP_001043020Oryza sativa Japonica Group
NP_001044165Oryza sativa Japonica Group
NP_001044725Oryza sativa Japonica Group
NP_001055783Oryza sativa Japonica Group
NP_001056115Oryza sativa Japonica Group
NP_001063267Oryza sativa Japonica Group
NP_001066954Oryza sativa Japonica Group
e_gw1.241.71.1Physcomitrella patens subsp. patens
estExt_Genewise1.C_180103Physcomitrella patens subsp. patens
estExt_Genewise1.C_320034Physcomitrella patens subsp. patens
fgenesh1_pg.scaffold_10000011Physcomitrella patens subsp. patens
29739.m003705Ricinus communis
29941.m000220Ricinus communis
30039.m000240Ricinus communis
30128.m008590Ricinus communis
30128.m008818Ricinus communis
30147.m014377Ricinus communis
30190.m011285Ricinus communis
NP_001061956Oryza sativa Japonica Group
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF084141.9999999999999944E-41168267IPR013623NADPH oxidase Respiratory burst
Gene3DG3DSA:1.10.238.101.199999857031013E-7206337IPR011992EF-hand-like domain
PROSITEPS502220.0264299IPR018249EF-HAND 2
PROSITEPS000180.0277289IPR018247EF-Hand 1, calcium-binding site
PfamPF017944.5999999999999993E-14427583IPR013130Ferric reductase-like transmembrane component, N-terminal
PRINTSPR004661.2000011745813377E-15528551IPR000778Cytochrome b245, heavy chain
PROSITEPS513840.0622742IPR017927Ferredoxin reductase-type FAD-binding domain
SuperFamilySSF633805.5E-17623741IPR017938Riboflavin synthase-like beta-barrel
PfamPF080223.900000000000007E-30625739IPR013112FAD-binding 8
PRINTSPR004661.2000011745813377E-15728741IPR000778Cytochrome b245, heavy chain
PfamPF080301.4000000000000063E-47746927IPR013121Ferric reductase, NAD binding
PRINTSPR004661.2000011745813377E-15751768IPR000778Cytochrome b245, heavy chain