You are querying gene by "AT1G63840".

Locus: AT1G63840 Alias: AT1G63840

Hormone Evidence Function category Gene Description PMID
abscisic acidGeneOntology - response to abscisic acid stimulus 16258012

Basic gene information ( show / hide contents )

Locus AT1G63840 | Chromosome: 1 | Strand: -
Description response to abscisic acid stimulus
Alias
AT1G63840( alias )
Gene model
AT1G63840.1 | From: 23693360 | To: 23694470
Sequence
AT1G63840.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
protein binding PMID:
zinc ion binding PMID:
cellular_component
endomembrane system PMID:
biological_process
response to abscisic acid stimulus PMID: 16258012
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT1G63840.1 
length: 1111 
miRNA : ath-miR854a
length: 21 
 
mfe: -30.7 kcal/mol 
p-value: 0.005225 
 
position  263 
target 5' U   U   U         U      U 
           CUC CUC CUCUCUGUC CUUGUC  
           GAG GAG GAGGGAUAG GAGUAG  
miRNA  3'                            
 
 
target: AT1G63840.1 
length: 1111 
miRNA : ath-miR854b
length: 21 
 
mfe: -30.7 kcal/mol 
p-value: 0.003742 
 
position  263 
target 5' U   U   U         U      U 
           CUC CUC CUCUCUGUC CUUGUC  
           GAG GAG GAGGGAUAG GAGUAG  
miRNA  3'                            
 
 
target: AT1G63840.1 
length: 1111 
miRNA : ath-miR854c
length: 21 
 
mfe: -30.7 kcal/mol 
p-value: 0.004676 
 
position  263 
target 5' U   U   U         U      U 
           CUC CUC CUCUCUGUC CUUGUC  
           GAG GAG GAGGGAUAG GAGUAG  
miRNA  3'                            
 
 
target: AT1G63840.1 
length: 1111 
miRNA : ath-miR854d
length: 21 
 
mfe: -30.7 kcal/mol 
p-value: 0.003902 
 
position  263 
target 5' U   U   U         U      U 
           CUC CUC CUCUCUGUC CUUGUC  
           GAG GAG GAGGGAUAG GAGUAG  
miRNA  3'                            
 
 
target: AT1G63840.1 
length: 1111 
miRNA : ath-miR854e
length: 21 
 
mfe: -30.7 kcal/mol 
p-value: 0.004913 
 
position  263 
target 5' U   U   U         U      U 
           CUC CUC CUCUCUGUC CUUGUC  
           GAG GAG GAGGGAUAG GAGUAG  
miRNA  3'                            
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_88211
AccessionTaxon
NP_176569 ( AT1G63840 )Arabidopsis thaliana
NP_198956Arabidopsis thaliana
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF000971.1E-589132IPR018957Zinc finger, C3HC4 RING-type
SMARTSM001845.800002906704664E-789132IPR001841Zinc finger, RING-type
PROSITEPS500890.089133IPR001841Zinc finger, RING-type