You are querying gene by "AT1G62740".

Locus: AT1G62740 Alias: AT1G62740

Expression of this gene is regulated by hormone (see microarray data for this gene), but no genetic evidence or Gene Ontology evidence yet supported that this is a hormone-related gene.

Basic gene information ( show / hide contents )

Locus AT1G62740 | Chromosome: 1 | Strand: +
Description stress-inducible protein, putative; FUNCTIONS IN: binding; INVOLVED IN: response to stress; LOCATED IN: cytosol, nucleus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide region (InterPro:IPR013026); BEST Arabidopsis thaliana protein match is: stress-inducible protein, putative (TAIR:AT1G12270.1); Has 34012 Blast hits to 14045 proteins in 887 species: Archae - 1292; Bacteria - 9292; Metazoa - 8243; Fungi - 1967; Plants - 2227; Viruses - 4; Other Eukaryotes - 10987 (source: NCBI BLink).
Alias
AT1G62740( alias )
Gene model
AT1G62740.1 | From: 23234621 | To: 23237208
Sequence
AT1G62740.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
binding PMID:
biological_process
response to stress PMID:
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT1G62740.1 
length: 1949 
miRNA : ath-miR396a
length: 21 
 
mfe: -29.6 kcal/mol 
p-value: 0.003963 
 
position  322 
target 5' U        U     C      G 
           CAGUUCGA GAAGC GUGGAG  
           GUCAAGUU UUUCG CACCUU  
miRNA  3'          C     A        
 
 
target: AT1G62740.1 
length: 1949 
miRNA : ath-miR396b
length: 21 
 
mfe: -27.8 kcal/mol 
p-value: 0.006713 
 
position  323 
target 5' C       U     C      G 
           AGUUCGA GAAGC GUGGAG  
           UCAAGUU UUUCG CACCUU  
miRNA  3' U       C     A        
 
 
target: AT1G62740.1 
length: 1949 
miRNA : ath-miR865-5p
length: 21 
 
mfe: -22.5 kcal/mol 
p-value: 0.029677 
 
position  305 
target 5' G    C               G 
           CUCA UUAGGUCUAAAU CA  
           GAGU AAUCUAGGUUUA GU  
miRNA  3'      U            A  A 
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_11644
AccessionTaxon
NP_001031620Arabidopsis thaliana
NP_172691Arabidopsis thaliana
NP_176461 ( AT1G62740 )Arabidopsis thaliana
NP_192977Arabidopsis thaliana
136069Chlamydomonas reinhardtii
NP_001047563Oryza sativa Japonica Group
NP_001053429Oryza sativa Japonica Group
e_gw1.06.00.119.1Ostreococcus tauri
30190.m010995Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
Gene3DG3DSA:1.25.40.103.499994668639488E-332115IPR011990Tetratricopeptide-like helical
SMARTSM000280.3599999892926219235IPR019734Tetratricopeptide repeat
PROSITEPS500050.0235IPR019734Tetratricopeptide repeat
PROSITEPS502930.02103IPR013026Tetratricopeptide repeat-containing
SMARTSM000289.1000005096726273669IPR019734Tetratricopeptide repeat
PROSITEPS500050.03669IPR019734Tetratricopeptide repeat
SMARTSM000281.4000004576398236E-770103IPR019734Tetratricopeptide repeat
PROSITEPS500050.070103IPR019734Tetratricopeptide repeat
PfamPF005156.59999999999999E-671103IPR001440Tetratricopeptide TPR-1
SMARTSM007271.699999222840494E-9134173IPR006636Heat shock chaperonin-binding
SMARTSM000280.0011999998570310132243276IPR019734Tetratricopeptide repeat
PROSITEPS500050.0243276IPR019734Tetratricopeptide repeat
PROSITEPS502930.0243483IPR013026Tetratricopeptide repeat-containing
Gene3DG3DSA:1.25.40.101.999996360345365E-46248500IPR011990Tetratricopeptide-like helical
PfamPF005150.04599999999999999248274IPR001440Tetratricopeptide TPR-1
SMARTSM000280.0027000003535638624277310IPR019734Tetratricopeptide repeat
PROSITEPS500050.0277310IPR019734Tetratricopeptide repeat
PfamPF005150.014999999999999994281305IPR001440Tetratricopeptide TPR-1
SMARTSM0002852.999994850898545318355IPR019734Tetratricopeptide repeat
PROSITEPS500050.0322355IPR019734Tetratricopeptide repeat
SMARTSM000280.1999999928705826382415IPR019734Tetratricopeptide repeat
PROSITEPS500050.0382415IPR019734Tetratricopeptide repeat
PfamPF005150.06399999999999997388415IPR001440Tetratricopeptide TPR-1
PfamPF005156.799999999999995E-4416449IPR001440Tetratricopeptide TPR-1
SMARTSM000289.100004256455728E-5416449IPR019734Tetratricopeptide repeat
PROSITEPS500050.0416449IPR019734Tetratricopeptide repeat
SMARTSM000281.600000650225277E-5450483IPR019734Tetratricopeptide repeat
PROSITEPS500050.0450483IPR019734Tetratricopeptide repeat
PfamPF005152.6000000000000003E-4451483IPR001440Tetratricopeptide TPR-1
SMARTSM007271.0E-11520559IPR006636Heat shock chaperonin-binding