You are querying gene by "AT1G59940".

Locus: AT1G59940 Alias: ARR3

Hormone Evidence Function category Gene Description PMID
cytokininMutant Hormone signal transduction Type A response regulator highly similar to bacterial two-component response regulators. Rapidly induced by cytokinin. Involved in red-light signaling. Acts redundantly with ARR4 in the control of circadian period in a cytokinin-independent manner 14973166
GeneOntology - response to cytokinin stimulus 9662428

Basic gene information ( show / hide contents )

Locus AT1G59940 | Chromosome: 1 | Strand: -
Description Type A response regulator highly similar to bacterial two-component response regulators. Rapidly induced by cytokinin. Involved in red-light signaling. Acts redundantly with ARR4 in the control of circadian period in a cytokinin-independent manner
Alias
ARR3( alias )
Gene model
AT1G59940.1 | From: 22069282 | To: 22070638
Sequence
AT1G59940.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
transcription regulator activity PMID: 12068096
two-component response regulator activity PMID: 12068096
cellular_component
cellular_component_unknown PMID:
biological_process
regulation of circadian rhythm PMID: 16326927
red light signaling pathway PMID: 14973166
cytokinin mediated signaling PMID: 12068096
two-component signal transduction system (phosphorelay) PMID: 9482949
response to cytokinin stimulus PMID: 9662428
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   cytokinin   ]

Genotype PMID Type
arr3 arr4 arr5 arr6 arr8 arr9 14973166 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT1G59940.1 
length: 1051 
miRNA : ath-miR831
length: 22 
 
mfe: -26.6 kcal/mol 
p-value: 0.005829 
 
position  487 
target 5' G                    U 
           AAGAAG GUGCGGAG GAUU  
           UUCUUC CAUGCUUC CUAG  
miRNA  3' G      U        U    U 
 
 
Gene1Gene2Positive/NegativeCategoryEnzyme activityEvidencePMID
AT1G59940AT1G03430negativeotherN/Amutance18262459
AT1G59940AT1G49190negativeotherN/Amutance18262459
AT1G59940AT1G59940Positivemodification PAT1G03430mutance11828030
AT1G59940AT1G59940Positivemodification PAT3G16360mutance11828030
AT1G59940AT1G59940Positivemodification PAT3G21510mutance11828030
AT1G59940AT1G59940Positivemodification PAT3G29350mutance11828030
AT1G59940AT1G59940Positivemodification PAT5G39340mutance11828030
AT1G59940AT1G67710negativeotherN/Amutance18262459
AT1G59940AT2G01760negativeotherN/Amutance18262459
AT1G59940AT2G18790PositiveotherN/Amolecular18262459
AT1G59940AT2G25180negativeotherN/Amutance18262459
AT1G59940AT2G27070negativeotherN/Amutance18262459
AT1G59940AT3G16360negativeotherN/Amutance18262459
AT1G59940AT3G16857negativeotherN/Amutance18262459
AT1G59940AT3G21510negativeotherN/Amutance18262459
AT1G59940AT3G29350negativeotherN/Amutance18262459
AT1G59940AT3G62670negativeotherN/Amutance18262459
AT1G59940AT4G16110negativeotherN/Amutance18262459
AT1G59940AT4G31920negativeotherN/Amutance18262459
AT1G59940AT5G07210negativeotherN/Amutance18262459
AT1G59940AT5G39340negativeotherN/Amutance18262459
AT1G59940AT5G58080negativeotherN/Amutance18262459

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_33985
AccessionTaxon
NP_172517Arabidopsis thaliana
NP_176202 ( AT1G59940 )Arabidopsis thaliana
DatabaseEntry IDE-valueStartEndInterPro IDDescription
SuperFamilySSF521722.7e-2730162IPR011006CheY-like
SMARTSM004481.4e-2033157IPR001789Signal transduction response regulator, receiver domain
PROSITEPS5011026.48634161IPR001789Signal transduction response regulator, receiver domain
PfamPF000728.9e-2135153IPR001789Signal transduction response regulator, receiver domain