You are querying gene by "AT1G59750".

Locus: AT1G59750 Alias: ARF1

Hormone Evidence Function category Gene Description PMID
auxinMutant Hormone signal transduction transcription factor ( repressor) 16176952
GeneOntology - response to auxin stimulus 9188533

Basic gene information ( show / hide contents )

Locus AT1G59750 | Chromosome: 1 | Strand: +
Description transcription factor ( repressor)
ARF1( alias )
Gene model
AT1G59750.1 | From: 21983049 | To: 21988078
AT1G59750.2 | From: 21983049 | To: 21988075
AT1G59750.3 | From: 21983049 | To: 21988098
AT1G59750.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT1G59750.2 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT1G59750.3 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
DNA binding PMID: 10476078
transcription factor activity PMID: 11118137
nucleus PMID: 10318972
negative regulation of transcription PMID: 16176952
response to auxin stimulus PMID: 9188533
leaf senescence PMID: 16176952
regulation of transcription, DNA-dependent PMID: 9188533
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   auxin   ]

Genotype PMID Type
arf1-4 16176952 mutant
arf1-5 arf2-8 16339187 mutant
arf1-5 16176952 mutant

Microarray data for this gene

Hormone treatment related datasets  
Abiotic stress treatment related datasets (in root)  
Abiotic stress treatment related datasets (in shoot)  
Development related datasets  

miRNA interaction information for this gene

(Note:target use cDNA sequence)
target: AT1G59750.1 
length: 2484 
miRNA : ath-miR400
length: 21 
mfe: -28.7 kcal/mol 
p-value: 0.000563 
position  872 
target 5' A      G              U 
miRNA  3'        A                
target: AT1G59750.2 
length: 2472 
miRNA : ath-miR400
length: 21 
mfe: -28.7 kcal/mol 
p-value: 0.000559 
position  872 
target 5' A      G              U 
miRNA  3'        A                
target: AT1G59750.3 
length: 2308 
miRNA : ath-miR400
length: 21 
mfe: -28.7 kcal/mol 
p-value: 0.000503 
position  676 
target 5' A      G              U 
miRNA  3'        A                
Gene1Gene2Positive/NegativeCategoryEnzyme activityEvidencePMID

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_16783
NP_001031208 ( AT1G59750 )Arabidopsis thaliana
NP_176184Arabidopsis thaliana
NP_849830Arabidopsis thaliana
NP_001047137Oryza sativa Japonica Group
NP_001052879Oryza sativa Japonica Group
e_gw1.64.107.1Physcomitrella patens subsp. patens
estExt_Genewise1.C_140304Physcomitrella patens subsp. patens
estExt_Genewise1.C_2800001Physcomitrella patens subsp. patens
gw1.341.65.1Physcomitrella patens subsp. patens
29609.m000586Ricinus communis
29609.m000587Ricinus communis
29742.m001397Ricinus communis
30068.m002516Ricinus communis
NP_001031548Arabidopsis thaliana
NP_001031706Arabidopsis thaliana
NP_182176Arabidopsis thaliana
NP_194129Arabidopsis thaliana
NP_567119Arabidopsis thaliana
NP_973701Arabidopsis thaliana
NP_201006Arabidopsis thaliana
NP_851244Arabidopsis thaliana
NP_974980Arabidopsis thaliana
NP_001045270Oryza sativa Japonica Group
NP_001066765Oryza sativa Japonica Group
NP_001067988Oryza sativa Japonica Group
30128.m008545Ricinus communis
30147.m014418Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF023626.400000000000012E-18124225IPR003340Transcriptional factor B3
PROSITEPS508630.0124226IPR003340Transcriptional factor B3
PfamPF023628.1e-21124225IPR003340Transcriptional factor B3
PROSITEPS5086310.518124226IPR003340Transcriptional factor B3
PfamPF065071.9000000000000047E-30250332IPR010525Auxin response factor
PfamPF065072.5e-33250332IPR010525Auxin response factor
PfamPF023095.000000000000014E-27450630IPR003311AUX/IAA protein
PfamPF023096.4e-30453633IPR003311AUX/IAA protein