You are querying gene by "AT1G58250".

Locus: AT1G58250 Alias: SAB

Hormone Evidence Function category Gene Description PMID
ethyleneGeneOntology - response to ethylene stimulus 7867930

Basic gene information ( show / hide contents )

Locus AT1G58250 | Chromosome: 1 | Strand: -
Description response to ethylene stimulus
Alias
SAB( alias )
Gene model
AT1G58250.1 | From: 21590707 | To: 21605286
Sequence
AT1G58250.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
cellular_component
endomembrane system PMID:
biological_process
multidimensional cell growth PMID:
cell growth PMID: 7867930
response to ethylene stimulus PMID: 7867930
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT1G58250.1 
length: 8335 
miRNA : ath-miR164a
length: 21 
 
mfe: -30.5 kcal/mol 
p-value: 0.044212 
 
position  856 
target 5' U  A   U               A 
           UG AUG UGUCCUGCUUC CCA  
           AC UGC ACGGGACGAAG GGU  
miRNA  3'    G               A     
 
 
target: AT1G58250.1 
length: 8335 
miRNA : ath-miR164b
length: 21 
 
mfe: -30.5 kcal/mol 
p-value: 0.054663 
 
position  856 
target 5' U  A   U               A 
           UG AUG UGUCCUGCUUC CCA  
           AC UGC ACGGGACGAAG GGU  
miRNA  3'    G               A     
 
 
target: AT1G58250.1 
length: 8335 
miRNA : ath-miR2933a
length: 22 
 
mfe: -28.4 kcal/mol 
p-value: 0.034376 
 
position  263 
target 5' U     G         G      U 
           GCGAA UUCUUCUUC GGUUUC  
           CGCUU AAGGAGAGG CUAAAG  
miRNA  3' C     A                  
 
 
target: AT1G58250.1 
length: 8335 
miRNA : ath-miR2933b
length: 22 
 
mfe: -28.4 kcal/mol 
p-value: 0.030773 
 
position  263 
target 5' U     G         G      U 
           GCGAA UUCUUCUUC GGUUUC  
           CGCUU AAGGAGAGG CUAAAG  
miRNA  3' C     A                  
 
 
target: AT1G58250.1 
length: 8335 
miRNA : ath-miR398a
length: 21 
 
mfe: -30.6 kcal/mol 
p-value: 0.030835 
 
position  3189 
target 5' C    C        U      U 
           AGGG UGGCUUGA GAACAC  
           UCCC ACUGGACU CUUGUG  
miRNA  3' U    C               U 
 
 
target: AT1G58250.1 
length: 8335 
miRNA : ath-miR398b
length: 21 
 
mfe: -32.4 kcal/mol 
p-value: 0.015671 
 
position  3188 
target 5' U     C        U      U 
           CAGGG UGGCUUGA GAACAC  
           GUCCC ACUGGACU CUUGUG  
miRNA  3'       C               U 
 
 
target: AT1G58250.1 
length: 8335 
miRNA : ath-miR398c
length: 21 
 
mfe: -32.4 kcal/mol 
p-value: 0.015976 
 
position  3188 
target 5' U     C        U      U 
           CAGGG UGGCUUGA GAACAC  
           GUCCC ACUGGACU CUUGUG  
miRNA  3'       C               U 
 
 
target: AT1G58250.1 
length: 8335 
miRNA : ath-miR426
length: 21 
 
mfe: -23.6 kcal/mol 
p-value: 0.082259 
 
position  3474 
target 5' U       G           C 
           GUAGGGA GGAUU CCAGG  
           CAUUCCU UUUAA GGUUU  
miRNA  3' G       G     A     U 
 
 
target: AT1G58250.1 
length: 8335 
miRNA : ath-miR837-5p
length: 21 
 
mfe: -23.0 kcal/mol 
p-value: 0.191643 
 
position  5160 
target 5' U   C                A 
           UGG AUG GCAAGAGGCUGG  
           ACU UGC UGUUCUUUGACU  
miRNA  3'     U   U            A 
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_44645
AccessionTaxon
NP_001078738Arabidopsis thaliana
NP_176121 ( AT1G58250 )Arabidopsis thaliana
NP_001050129Oryza sativa Japonica Group
estExt_fgenesh1_pg.C_2610004Physcomitrella patens subsp. patens
29596.m000718Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF103476.9e-2511551300IPR019441Protein of unknown function FMP27, domain-4
PfamPF103519.3e-12619072444IPR019443Protein of unknown function FMP27, domain-6, C-terminal