You are querying gene by "AT1G58220".

Locus: AT1G58220 Alias: AT1G58220

Hormone Evidence Function category Gene Description PMID
salicylic acidGeneOntology - response to salicylic acid stimulus 16463103
abscisic acidGeneOntology - response to abscisic acid stimulus 16463103
jasmonic acidGeneOntology - response to jasmonic acid stimulus 16463103

Basic gene information ( show / hide contents )

Locus AT1G58220 | Chromosome: 1 | Strand: -
Description response to salicylic acid stimulus
Alias
AT1G58220( alias )
AT1G58220( alias )
AT1G58220( alias )
Gene model
AT1G58220.1 | From: 21561908 | To: 21566630
Sequence
AT1G58220.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
DNA binding PMID:
transcription factor activity PMID:
biological_process
response to salicylic acid stimulus PMID: 16463103
response to jasmonic acid stimulus PMID: 16463103
response to abscisic acid stimulus PMID: 16463103
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT1G58220.1 
length: 2946 
miRNA : ath-miR837-5p
length: 21 
 
mfe: -25.6 kcal/mol 
p-value: 0.030470 
 
position  895 
target 5' C     A               U 
           UGAGG GGAUGAGGAGCUGAU  
           ACUUU CUUGUUCUUUGACUA  
miRNA  3'       G                 
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_51280
AccessionTaxon
NP_172442Arabidopsis thaliana
NP_176118 ( AT1G58220 )Arabidopsis thaliana
NP_001047100Oryza sativa Japonica Group
estExt_fgenesh1_pg.C_1140084Physcomitrella patens subsp. patens
29908.m006268Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
Gene3DG3DSA:1.10.10.602.7000018358079286E-9186254IPR012287Homeodomain-related
SuperFamilySSF466891.5E-11188254IPR009057Homeodomain-like
PROSITEPS512940.0190247IPR017930HTH transcriptional regulator, Myb-type, DNA-binding
PANTHERPTHR106413.3999997243771876E-7194223IPR015495Myb transcription factor
SMARTSM007171.2000011745813376E-10194245IPR001005SANT, DNA-binding
PfamPF002496.59999999999999E-6195239IPR014778Myb, DNA-binding