You are querying gene by "AT1G57560".

Locus: AT1G57560 Alias: AtMYB50

Hormone Evidence Function category Gene Description PMID
salicylic acidGeneOntology - response to salicylic acid stimulus 16463103
auxinGeneOntology - response to auxin stimulus 16463103
gibberellinGeneOntology - response to gibberellin stimulus 16463103
jasmonic acidGeneOntology - response to jasmonic acid stimulus 16463103

Basic gene information ( show / hide contents )

Locus AT1G57560 | Chromosome: 1 | Strand: +
Description response to auxin stimulus
Alias
AtMYB50( alias )
Gene model
AT1G57560.1 | From: 21320493 | To: 21321729
Sequence
AT1G57560.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
DNA binding PMID:
transcription factor activity PMID: 11118137
biological_process
response to salicylic acid stimulus PMID: 16463103
response to auxin stimulus PMID: 16463103
regulation of transcription, DNA-dependent PMID:
response to gibberellin stimulus PMID: 16463103
response to jasmonic acid stimulus PMID: 16463103
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

No miRNA interaction information for this gene.

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_25683
AccessionTaxon
NP_001031571Arabidopsis thaliana
NP_001118913Arabidopsis thaliana
NP_192077Arabidopsis thaliana
e_gw1.211.99.1Physcomitrella patens subsp. patens
e_gw1.24.66.1Physcomitrella patens subsp. patens
fgenesh1_pg.scaffold_189000016Physcomitrella patens subsp. patens
NP_172425Arabidopsis thaliana
NP_176068 ( AT1G57560 )Arabidopsis thaliana
NP_001042773Oryza sativa Japonica Group
NP_001054597Oryza sativa Japonica Group
NP_850879Arabidopsis thaliana
30147.m013885Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR106410.03289IPR015495Myb transcription factor
PROSITEPS512940.0965IPR017930HTH transcriptional regulator, Myb-type, DNA-binding
Gene3DG3DSA:1.10.10.604.799997768362451E-161264IPR012287Homeodomain-related
SMARTSM007173.799998626447902E-141363IPR001005SANT, DNA-binding
PfamPF002493.500000000000003E-131461IPR014778Myb, DNA-binding
SuperFamilySSF466894.3E-231483IPR009057Homeodomain-like
SMARTSM007173.599996434359868E-1266114IPR001005SANT, DNA-binding
PROSITEPS512940.066116IPR017930HTH transcriptional regulator, Myb-type, DNA-binding
PfamPF002493.0000000000000037E-967110IPR014778Myb, DNA-binding
Gene3DG3DSA:1.10.10.602.4999981195644407E-1668116IPR012287Homeodomain-related
SuperFamilySSF466899.2E-1286146IPR009057Homeodomain-like