You are querying gene by "AT1G56070".

Locus: AT1G56070 Alias: AT1G56075.1

Hormone Evidence Function category Gene Description PMID
abscisic acidMutant Hormone signal transduction LOW EXPRESSION OF OSMOTICALLY RESPONSE GENES1; encodes a translation elongation factor 2-like protein that is involved in cold-induced translation. 12032361

Basic gene information ( show / hide contents )

Locus AT1G56070 | Chromosome: 1 | Strand: -
Description LOW EXPRESSION OF OSMOTICALLY RESPONSE GENES1; encodes a translation elongation factor 2-like protein that is involved in cold-induced translation.
AT1G56075.1( alias )
LOS1( alias )
Gene model
AT1G56070.1 | From: 20971595 | To: 20975407
AT1G56070.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
translation factor activity, nucleic acid binding PMID:
translation elongation factor activity PMID:
response to cold PMID: 12032361
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   abscisic acid   ]

Genotype PMID Type
los1-1 12032361 mutant

Microarray data for this gene

Hormone treatment related datasets  
Abiotic stress treatment related datasets (in root)  
Abiotic stress treatment related datasets (in shoot)  
Development related datasets  

miRNA interaction information for this gene

(Note:target use cDNA sequence)
target: AT1G56070.1 
length: 2958 
miRNA : ath-miR836
length: 24 
mfe: -32.0 kcal/mol 
p-value: 0.008804 
position  2370 
target 5' A        C            A  C 
miRNA  3' G        U                 
target: AT1G56070.1 
length: 2958 
miRNA : ath-miR852
length: 21 
mfe: -26.4 kcal/mol 
p-value: 0.016929 
position  729 
target 5' G       U           G 
miRNA  3' G       U       U   A 
Gene1Gene2Positive/NegativeCategoryEnzyme activityEvidencePMID

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_10360
NP_001154611Arabidopsis thaliana
NP_849818 ( AT1G56070 )Arabidopsis thaliana
24524Chlamydomonas reinhardtii
NP_001044104Oryza sativa Japonica Group
NP_001044211Oryza sativa Japonica Group
NP_001046972Oryza sativa Japonica Group
NP_001052057Oryza sativa Japonica Group
estExt_gwp_GeneWisePlus.C_Chr_14.00010027Ostreococcus tauri
estExt_Genewise1.C_1380094Physcomitrella patens subsp. patens
estExt_Genewise1.C_1380097Physcomitrella patens subsp. patens
estExt_Genewise1.C_34950001Physcomitrella patens subsp. patens
estExt_Genewise1.C_4310001Physcomitrella patens subsp. patens
estExt_fgenesh1_pm.C_4310002Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_1380085Physcomitrella patens subsp. patens
29923.m000812Ricinus communis
30169.m006349Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF000097.200000000000025E-5717341IPR000795Protein synthesis factor, GTP-binding
PRINTSPR003154.000003008698826E-142134IPR000795Protein synthesis factor, GTP-binding
PROSITEPS003010.05873IPR000795Protein synthesis factor, GTP-binding
PRINTSPR003154.000003008698826E-146573IPR000795Protein synthesis factor, GTP-binding
PRINTSPR003154.000003008698826E-14101111IPR000795Protein synthesis factor, GTP-binding
PRINTSPR003154.000003008698826E-14117128IPR000795Protein synthesis factor, GTP-binding
PRINTSPR003154.000003008698826E-14153162IPR000795Protein synthesis factor, GTP-binding
SuperFamilySSF504471.3E-41342479IPR009000Translation elongation/initiation factor/Ribosomal, beta-barrel
PfamPF031441.4E-8393468IPR004161Translation elongation factor EFTu/EF1A, domain 2
SuperFamilySSF549809.8E-21482561IPR009022Elongation factor G/III/V
SuperFamilySSF542116.2E-73562726IPR020568Ribosomal protein S5 domain 2-type fold
Gene3DG3DSA: protein S5 domain 2-type fold, subgroup
SMARTSM008892.9000035467798053E-24606722IPR005517Translation elongation factor EFG/EF2, domain IV
PfamPF037646.900000000000011E-34609722IPR005517Translation elongation factor EFG/EF2, domain IV
PfamPF006791.6000000000000007E-17724811IPR000640Translation elongation factor EFG/EF2, C-terminal
SMARTSM008382.0999980669153363E-16724813IPR000640Translation elongation factor EFG/EF2, C-terminal
SuperFamilySSF549807.5E-32727843IPR009022Elongation factor G/III/V
Gene3DG3DSA: protein S5 domain 2-type fold, subgroup