You are querying gene by "AT1G56010".

Locus: AT1G56010 Alias: anac021

Hormone Evidence Function category Gene Description PMID
ethyleneGeneOntology - response to ethylene stimulus 16359384
auxinGeneOntology - auxin mediated signaling pathway 11114891

Basic gene information ( show / hide contents )

Locus AT1G56010 | Chromosome: 1 | Strand: -
Description response to ethylene stimulus
Alias
anac021( alias )
ANAC022( alias )
NAC1( alias )
Gene model
AT1G56010.1 | From: 20950236 | To: 20951705
AT1G56010.2 | From: 20950236 | To: 20952946
Sequence
AT1G56010.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT1G56010.2 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
transcription factor activity PMID: 11118137
biological_process
primary shoot apical meristem specification PMID: 16359384
response to auxin stimulus PMID: 16359384
multicellular organismal development PMID:
response to salt stress PMID: 16359384
auxin mediated signaling pathway PMID: 11114891
lateral root development PMID: 16359384
response to ethylene stimulus PMID: 16359384
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT1G56010.1 
length: 1368 
miRNA : ath-miR164a
length: 21 
 
mfe: -43.4 kcal/mol 
p-value: 0.000013 
 
position  777 
target 5' A      A             A 
           GCACGU CCCUGCUUCUCCA  
           CGUGCA GGGACGAAGAGGU  
miRNA  3' A      C               
 
 
target: AT1G56010.1 
length: 1368 
miRNA : ath-miR164b
length: 21 
 
mfe: -43.4 kcal/mol 
p-value: 0.000049 
 
position  777 
target 5' A      A             A 
           GCACGU CCCUGCUUCUCCA  
           CGUGCA GGGACGAAGAGGU  
miRNA  3' A      C               
 
 
target: AT1G56010.1 
length: 1368 
miRNA : ath-miR164c
length: 21 
 
mfe: -43.4 kcal/mol 
p-value: 0.000089 
 
position  777 
target 5' A      A             A 
           GCACGU CCCUGCUUCUCCA  
           CGUGCA GGGACGAAGAGGU  
miRNA  3' G      C               
 
 
target: AT1G56010.2 
length: 1393 
miRNA : ath-miR164a
length: 21 
 
mfe: -43.4 kcal/mol 
p-value: 0.000013 
 
position  802 
target 5' A      A             A 
           GCACGU CCCUGCUUCUCCA  
           CGUGCA GGGACGAAGAGGU  
miRNA  3' A      C               
 
 
target: AT1G56010.2 
length: 1393 
miRNA : ath-miR164b
length: 21 
 
mfe: -43.4 kcal/mol 
p-value: 0.000050 
 
position  802 
target 5' A      A             A 
           GCACGU CCCUGCUUCUCCA  
           CGUGCA GGGACGAAGAGGU  
miRNA  3' A      C               
 
 
target: AT1G56010.2 
length: 1393 
miRNA : ath-miR164c
length: 21 
 
mfe: -43.4 kcal/mol 
p-value: 0.000092 
 
position  802 
target 5' A      A             A 
           GCACGU CCCUGCUUCUCCA  
           CGUGCA GGGACGAAGAGGU  
miRNA  3' G      C               
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_45007
AccessionTaxon
NP_001030683Arabidopsis thaliana
NP_175997Arabidopsis thaliana
NP_001058346Oryza sativa Japonica Group
NP_001061213Oryza sativa Japonica Group
29650.m000275Ricinus communis
NP_849817 ( AT1G56010 )Arabidopsis thaliana
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PROSITEPS510050.01104IPR003441No apical meristem (NAM) protein
SuperFamilySSF1019414.4E-401105IPR003441No apical meristem (NAM) protein
SuperFamilySSF1019418.1e-653172IPR003441No apical meristem (NAM) protein
PfamPF023652.1000000000000034E-27578IPR003441No apical meristem (NAM) protein
PfamPF023651.2e-4819145IPR003441No apical meristem (NAM) protein
PROSITEPS5100556.34419171IPR003441No apical meristem (NAM) protein