You are querying gene by "AT1G55020".

Locus: AT1G55020 Alias: LOX1

Hormone Evidence Function category Gene Description PMID
abscisic acidGeneOntology - response to abscisic acid stimulus 7506426
jasmonic acidGeneOntology - response to jasmonic acid stimulus 7506426

Basic gene information ( show / hide contents )

Locus AT1G55020 | Chromosome: 1 | Strand: +
Description response to abscisic acid stimulus
Alias
LOX1( alias )
Gene model
AT1G55020.1 | From: 20529375 | To: 20533940
Sequence
AT1G55020.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
lipoxygenase activity PMID: 7506426
cellular_component
cellular_component_unknown PMID:
biological_process
response to wounding PMID: 7506426
membrane disassembly PMID: 7506426
response to jasmonic acid stimulus PMID: 7506426
root development PMID: 17369372
defense response to bacterium, incompatible interaction PMID: 7506426
response to abscisic acid stimulus PMID: 7506426
defense response PMID: 7506426
jasmonic acid biosynthetic process PMID: 7506426
growth PMID: 7506426
KEGG pathway This gene participates in 1 pathways:
Pathway Enzyme
Linoleic acid metabolism linoleate 13-lipoxygenase
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT1G55020.1 
length: 2800 
miRNA : ath-miR831
length: 22 
 
mfe: -27.1 kcal/mol 
p-value: 0.014949 
 
position  2101 
target 5' A      U C      A      U 
           AGGAGG G GCGAGG AGGUCA  
           UUCUUC C UGCUUC UCUAGU  
miRNA  3' G      U A               
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_11048
AccessionTaxon
29468.m000030Ricinus communis
29726.m003891Ricinus communis
29808.m000898Ricinus communis
29851.m002422Ricinus communis
29851.m002424Ricinus communis
29929.m004699Ricinus communis
30128.m008781Ricinus communis
NP_176923Arabidopsis thaliana
NP_177396Arabidopsis thaliana
NP_188879Arabidopsis thaliana
NP_564021Arabidopsis thaliana
NP_566875Arabidopsis thaliana
144677Chlamydomonas reinhardtii
NP_001049158Oryza sativa Japonica Group
NP_001050993Oryza sativa Japonica Group
NP_001050995Oryza sativa Japonica Group
NP_001052913Oryza sativa Japonica Group
NP_001055143Oryza sativa Japonica Group
NP_001062199Oryza sativa Japonica Group
NP_001062200Oryza sativa Japonica Group
NP_001068135Oryza sativa Japonica Group
e_gw1.171.1.1Physcomitrella patens subsp. patens
e_gw1.21.1.1Physcomitrella patens subsp. patens
e_gw1.434.22.1Physcomitrella patens subsp. patens
e_gw1.97.30.1Physcomitrella patens subsp. patens
estExt_Genewise1.C_4190013Physcomitrella patens subsp. patens
estExt_fgenesh1_pg.C_4190004Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_2320058Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_4190009Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_4190017Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_700115Physcomitrella patens subsp. patens
29680.m001710Ricinus communis
30152.m002449Ricinus communis
30169.m006387Ricinus communis
30169.m006389Ricinus communis
30178.m000859Ricinus communis
NP_175900 ( AT1G55020 )Arabidopsis thaliana
NP_001046180Oryza sativa Japonica Group
NP_001050990Oryza sativa Japonica Group
NP_001051212Oryza sativa Japonica Group
NP_001067011Oryza sativa Japonica Group
NP_001067015Oryza sativa Japonica Group
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR117710.013859IPR000907Lipoxygenase
Gene3DG3DSA:2.60.60.201.9000069431526997E-6114183IPR001024Lipoxygenase, LH2
SuperFamilySSF497231.8E-5518165IPR008976Lipase/lipooxygenase, PLAT/LH2
SMARTSM003084.300001706458689E-6719162IPR001024Lipoxygenase, LH2
PROSITEPS500950.021161IPR001024Lipoxygenase, LH2
PfamPF014775.0000000000000135E-1856159IPR001024Lipoxygenase, LH2
PRINTSPR004682.7000136937899035E-92131149IPR001246Lipoxygenase, plant
PRINTSPR004682.7000136937899035E-92157178IPR001246Lipoxygenase, plant
PROSITEPS513930.0164859IPR013819Lipoxygenase, C-terminal
SuperFamilySSF484840.0166859IPR013819Lipoxygenase, C-terminal
PfamPF003050.0171843IPR013819Lipoxygenase, C-terminal
PRINTSPR004682.7000136937899035E-92196212IPR001246Lipoxygenase, plant
PRINTSPR004682.7000136937899035E-92226245IPR001246Lipoxygenase, plant
PRINTSPR004682.7000136937899035E-92296317IPR001246Lipoxygenase, plant
PRINTSPR004682.7000136937899035E-92345361IPR001246Lipoxygenase, plant
PRINTSPR004682.7000136937899035E-92384403IPR001246Lipoxygenase, plant
PRINTSPR004682.7000136937899035E-92450474IPR001246Lipoxygenase, plant
PRINTSPR000871.2999992446817899E-21496513IPR013819Lipoxygenase, C-terminal
PRINTSPR000871.2999992446817899E-21514531IPR013819Lipoxygenase, C-terminal
PROSITEPS007110.0514528IPR020833Lipoxygenase, iron binding site
PRINTSPR000871.2999992446817899E-21534554IPR013819Lipoxygenase, C-terminal
PROSITEPS000810.0541551IPR020834Lipoxygenase, conserved site
PRINTSPR004682.7000136937899035E-92772786IPR001246Lipoxygenase, plant