You are querying gene by "AT1G54990".

Locus: AT1G54990 Alias: AXR4

Hormone Evidence Function category Gene Description PMID
auxinMutant Hormone transportion 7704045
GeneOntology - response to auxin stimulus 11135112

Basic gene information ( show / hide contents )

Locus AT1G54990 | Chromosome: 1 | Strand: +
Description
Alias
AXR4( alias )
RGR( alias )
RGR1( alias )
Gene model
AT1G54990.1 | From: 20515186 | To: 20517348
Sequence
AT1G54990.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
molecular_function_unknown PMID:
cellular_component
endoplasmic reticulum PMID: 16618929
biological_process
response to auxin stimulus PMID: 11135112
response to mechanical stimulus PMID: 9847088
auxin polar transport PMID: 16690816
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   auxin   ]

Genotype PMID Type
aux1-7 axr4-1 7704045 mutant
axr4-1 7704045 mutant
axr4-1 axr1-12 7704045 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT1G54990.1 
length: 1660 
miRNA : ath-miR865-5p
length: 21 
 
mfe: -25.2 kcal/mol 
p-value: 0.003813 
 
position  417 
target 5' A G                  U 
           U GGUUAGGUCUAAGUUCGU  
           A UUAAUCUAGGUUUAAGUA  
miRNA  3' G G                    
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_59100
AccessionTaxon
NP_564672 ( AT1G54990 )Arabidopsis thaliana
NP_001068050Oryza sativa Japonica Group
estExt_fgenesh1_pg.C_310096Physcomitrella patens subsp. patens
30128.m008779Ricinus communis

No related Cross Link information for this gene.