You are querying gene by "AT1G54100".

Locus: AT1G54100 Alias: ALDH7B4

Hormone Evidence Function category Gene Description PMID
abscisic acidGeneOntology - response to abscisic acid stimulus 15830124

Basic gene information ( show / hide contents )

Locus AT1G54100 | Chromosome: 1 | Strand: -
Description response to abscisic acid stimulus
Alias
ALDH7B4( alias )
Gene model
AT1G54100.1 | From: 20198932 | To: 20202798
AT1G54100.2 | From: 20198932 | To: 20202641
Sequence
AT1G54100.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT1G54100.2 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
3-chloroallyl aldehyde dehydrogenase activity PMID:
biological_process
response to salt stress PMID: 15830124
response to abscisic acid stimulus PMID: 15830124
response to desiccation PMID: 15830124
KEGG pathway This gene participates in 16 pathways:
Pathway Enzyme
Glycolysis / Gluconeogenesis aldehyde dehydrogenase (NAD+)
Ascorbate and aldarate metabolism aldehyde dehydrogenase (NAD+)
Pyruvate metabolism aldehyde dehydrogenase (NAD+)
Propanoate metabolism aldehyde dehydrogenase (NAD+)
Butanoate metabolism aldehyde dehydrogenase (NAD+)
Fatty acid metabolism aldehyde dehydrogenase (NAD+)
Bile acid biosynthesis aldehyde dehydrogenase (NAD+)
Glycerolipid metabolism aldehyde dehydrogenase (NAD+)
Valine, leucine and isoleucine degradation aldehyde dehydrogenase (NAD+)
Lysine degradation aldehyde dehydrogenase (NAD+)
Arginine and proline metabolism aldehyde dehydrogenase (NAD+)
Histidine metabolism aldehyde dehydrogenase (NAD+)
Tryptophan metabolism aldehyde dehydrogenase (NAD+)
beta-Alanine metabolism aldehyde dehydrogenase (NAD+)
Limonene and pinene degradation aldehyde dehydrogenase (NAD+)
1,2-Dichloroethane degradation aldehyde dehydrogenase (NAD+)
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT1G54100.1 
length: 1869 
miRNA : ath-miR773
length: 21 
 
mfe: -28.2 kcal/mol 
p-value: 0.009743 
 
position  1590 
target 5' U  U  U              C 
           GG CG GAAGCUGGAAGCGA  
           UC GU UUUCGACCUUCGUU  
miRNA  3' C  U                 U 
 
 
target: AT1G54100.2 
length: 1818 
miRNA : ath-miR2933a
length: 22 
 
mfe: -28.5 kcal/mol 
p-value: 0.004384 
 
position  11 
target 5' A     U             C   G 
           GGUGA UUUUUUCUCUGAU UUC  
           CCGCU AAAGGAGAGGCUA AAG  
miRNA  3'       U                   
 
 
target: AT1G54100.2 
length: 1818 
miRNA : ath-miR2933b
length: 22 
 
mfe: -28.5 kcal/mol 
p-value: 0.006055 
 
position  11 
target 5' A     U             C   G 
           GGUGA UUUUUUCUCUGAU UUC  
           CCGCU AAAGGAGAGGCUA AAG  
miRNA  3'       U                   
 
 
target: AT1G54100.2 
length: 1818 
miRNA : ath-miR773
length: 21 
 
mfe: -28.2 kcal/mol 
p-value: 0.009430 
 
position  1539 
target 5' U  U  U              C 
           GG CG GAAGCUGGAAGCGA  
           UC GU UUUCGACCUUCGUU  
miRNA  3' C  U                 U 
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_14216
AccessionTaxon
NP_175812Arabidopsis thaliana
NP_849807 ( AT1G54100 )Arabidopsis thaliana
NP_001063281Oryza sativa Japonica Group
estExt_fgenesh1_kg.C_2370002Physcomitrella patens subsp. patens
DatabaseEntry IDE-valueStartEndInterPro IDDescription
SuperFamilySSF537200.017495IPR016161Aldehyde/histidinol dehydrogenase
Gene3DG3DSA:3.40.605.105.899988094056823E-7928331IPR016162Aldehyde dehydrogenase, N-terminal
PfamPF001711.2999999999999797E-12636488IPR015590Aldehyde dehydrogenase
PANTHERPTHR116990.063495IPR015590Aldehyde dehydrogenase
PROSITEPS006870.0265272IPR016160Aldehyde dehydrogenase, conserved site